RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 MPNDQ8N594 471 aa13.4□□□□□ -0.26
COL4A3-201ENST00000304990 C2orf69Q8N8R5 385 aa13.4□□□□□ -0.26
COL4A3-201ENST00000304990 ZIC5Q96T25 663 aa13.4□□□□□ -0.26
COL4A3-201ENST00000304990 PGAP2Q9UHJ9 254 aa13.4□□□□□ -0.26
COL4A3-201ENST00000304990 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.26
COL4A3-201ENST00000304990 TRPA1O75762 1119 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 KIF23Q02241 960 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-201ENST00000304990 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-201ENST00000304990 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
COL4A3-201ENST00000304990 NEFMP07197 916 aa13.38□□□□□ -0.27
COL4A3-201ENST00000304990 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-201ENST00000304990 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-201ENST00000304990 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
COL4A3-201ENST00000304990 GBA2Q9HCG7 927 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-201ENST00000304990 ABCC4O15439 1325 aa13.38□□□□□ -0.27
COL4A3-201ENST00000304990 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
COL4A3-201ENST00000304990 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
COL4A3-201ENST00000304990 NTSR2O95665 410 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 KRT26Q7Z3Y9 468 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
COL4A3-201ENST00000304990 DCPSQ96C86 337 aaKnown RBP13.37□□□□□ -0.27
COL4A3-201ENST00000304990 POLR2AP24928 1970 aaKnown RBP13.37□□□□□ -0.27
COL4A3-201ENST00000304990 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
COL4A3-201ENST00000304990 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
COL4A3-201ENST00000304990 LAMB2P55268 1798 aa13.36□□□□□ -0.27
COL4A3-201ENST00000304990 BBOX1O75936 387 aa13.36□□□□□ -0.27
COL4A3-201ENST00000304990 RBM26Q5T8P6 1007 aaKnown RBP13.36□□□□□ -0.27
COL4A3-201ENST00000304990 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
COL4A3-201ENST00000304990 CTU1Q7Z7A3 348 aaKnown RBP13.36□□□□□ -0.27
COL4A3-201ENST00000304990 SP8Q8IXZ3 490 aa13.36□□□□□ -0.27
COL4A3-201ENST00000304990 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
COL4A3-201ENST00000304990 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
COL4A3-201ENST00000304990 RTFDC1Q9BY42 306 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-201ENST00000304990 RNF186Q9NXI6 227 aa13.36□□□□□ -0.27
COL4A3-201ENST00000304990 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
COL4A3-201ENST00000304990 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-201ENST00000304990 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-201ENST00000304990 DLK2Q6UY11 383 aa13.35□□□□□ -0.27
COL4A3-201ENST00000304990 GIGYF2Q6Y7W6 1299 aaKnown RBP13.35□□□□□ -0.27
COL4A3-201ENST00000304990 SAMD7Q7Z3H4 446 aa13.35□□□□□ -0.27
COL4A3-201ENST00000304990 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-201ENST00000304990 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-201ENST00000304990 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
COL4A3-201ENST00000304990 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
COL4A3-201ENST00000304990 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-201ENST00000304990 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
COL4A3-201ENST00000304990 ADM5C9JUS6 153 aa13.33□□□□□ -0.28
COL4A3-201ENST00000304990 SULF1Q8IWU6 871 aa13.33□□□□□ -0.28
COL4A3-201ENST00000304990 TNRC18O15417 2968 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-201ENST00000304990 TAF1P21675 1872 aa13.33□□□□□ -0.28
COL4A3-201ENST00000304990 YDJCA8MPS7 323 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 WASHC4Q2M389 1173 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 SLC10A5Q5PT55 438 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
COL4A3-201ENST00000304990 DPF2Q92785 391 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 HPS5Q9UPZ3 1129 aa13.32□□□□□ -0.28
COL4A3-201ENST00000304990 DDX60Q8IY21 1712 aaKnown RBP13.32□□□□□ -0.28
COL4A3-201ENST00000304990 G3V3G9 751 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 PSMD14O00487 310 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 SLC10A3P09131 477 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-201ENST00000304990 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
COL4A3-201ENST00000304990 GRAPQ13588 217 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-201ENST00000304990 GCC1Q96CN9 775 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
COL4A3-201ENST00000304990 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
COL4A3-201ENST00000304990 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
COL4A3-201ENST00000304990 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
COL4A3-201ENST00000304990 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
COL4A3-201ENST00000304990 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
COL4A3-201ENST00000304990 HSP90AB3PQ58FF7 597 aa13.3□□□□□ -0.28
COL4A3-201ENST00000304990 TMC4Q7Z404 712 aa13.3□□□□□ -0.28
COL4A3-201ENST00000304990 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
COL4A3-201ENST00000304990 TRMT112Q9UI30 125 aaKnown RBP13.3□□□□□ -0.28
COL4A3-201ENST00000304990 NSFL1CQ9UNZ2 370 aaKnown RBP13.3□□□□□ -0.28
COL4A3-201ENST00000304990 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
COL4A3-201ENST00000304990 RPS12P25398 132 aaKnown RBP13.29□□□□□ -0.28
COL4A3-201ENST00000304990 GGA3Q9NZ52 723 aa13.29□□□□□ -0.28
COL4A3-201ENST00000304990 LRRC37AA6NMS7 1700 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 ECE2O60344 883 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 EGFRP00533 1210 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 AIMP1Q12904 312 aaKnown RBP13.28□□□□□ -0.28
COL4A3-201ENST00000304990 DOK7Q18PE1 504 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 CDCA5Q96FF9 252 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 EYA3Q99504 573 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
COL4A3-201ENST00000304990 RASAL3Q86YV0 1011 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms