RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 HLFQ16534 295 aa23.43■■□□□ 1.34
HOXC4-201ENST00000303406 TM6SF1Q9BZW5 370 aa23.43■■□□□ 1.34
HOXC4-201ENST00000303406 UBAP1LF5GYI3 381 aa23.43■■□□□ 1.34
HOXC4-201ENST00000303406 DZIP3Q86Y13 1208 aaKnown RBP23.43■■□□□ 1.34
HOXC4-201ENST00000303406 TMX3Q96JJ7 454 aa23.43■■□□□ 1.34
HOXC4-201ENST00000303406 AK7Q96M32 723 aa23.43■■□□□ 1.34
HOXC4-201ENST00000303406 CCDC87Q9NVE4 849 aa23.43■■□□□ 1.34
HOXC4-201ENST00000303406 MYH3P11055 1940 aa23.42■■□□□ 1.34
HOXC4-201ENST00000303406 CYP2E1P05181 493 aaPredicted RBP23.42■■□□□ 1.34
HOXC4-201ENST00000303406 BCL9LQ86UU0 1499 aa23.42■■□□□ 1.34
HOXC4-201ENST00000303406 PALLDQ8WX93 1383 aa23.41■■□□□ 1.34
HOXC4-201ENST00000303406 INTS5Q6P9B9 1019 aaKnown RBP23.41■■□□□ 1.34
HOXC4-201ENST00000303406 ZNF34Q8IZ26 560 aa23.41■■□□□ 1.34
HOXC4-201ENST00000303406 MAP4K1Q92918 833 aa23.41■■□□□ 1.34
HOXC4-201ENST00000303406 FOXD4L1Q9NU39 408 aa23.41■■□□□ 1.34
HOXC4-201ENST00000303406 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
HOXC4-201ENST00000303406 CCDC9Q9Y3X0 531 aaKnown RBP23.41■■□□□ 1.34
HOXC4-201ENST00000303406 LOC102724428A0A0B4J2F2 783 aa23.4■■□□□ 1.34
HOXC4-201ENST00000303406 SIK1P57059 783 aa23.4■■□□□ 1.34
HOXC4-201ENST00000303406 NECTIN1Q15223 517 aa23.4■■□□□ 1.34
HOXC4-201ENST00000303406 FAM89AQ96GI7 184 aa23.4■■□□□ 1.34
HOXC4-201ENST00000303406 CEP126Q9P2H0 1117 aa23.4■■□□□ 1.34
HOXC4-201ENST00000303406 COL5A3P25940 1745 aaPredicted RBP23.4■■□□□ 1.34
HOXC4-201ENST00000303406 SPATA31A6Q5VVP1 1343 aa23.4■■□□□ 1.34
HOXC4-201ENST00000303406 PTH1RQ03431 593 aa23.39■■□□□ 1.34
HOXC4-201ENST00000303406 IFIT5Q13325 482 aaKnown RBP23.39■■□□□ 1.34
HOXC4-201ENST00000303406 LRRC24Q50LG9 513 aa23.39■■□□□ 1.34
HOXC4-201ENST00000303406 FNBP4Q8N3X1 1017 aaPredicted RBP23.39■■□□□ 1.34
HOXC4-201ENST00000303406 FAM227BQ96M60 508 aa23.39■■□□□ 1.34
HOXC4-201ENST00000303406 TTC14Q96N46 770 aa23.39■■□□□ 1.34
HOXC4-201ENST00000303406 KAT6BQ8WYB5 2073 aa23.38■■□□□ 1.33
HOXC4-201ENST00000303406 ATP6V1AP38606 617 aa23.38■■□□□ 1.33
HOXC4-201ENST00000303406 A0A0D9SFI3 127 aa23.38■■□□□ 1.33
HOXC4-201ENST00000303406 RASEFQ8IZ41 740 aa23.38■■□□□ 1.33
HOXC4-201ENST00000303406 KBTBD3Q8NAB2 608 aa23.38■■□□□ 1.33
HOXC4-201ENST00000303406 ZNF594Q96JF6 807 aaPredicted RBP23.38■■□□□ 1.33
HOXC4-201ENST00000303406 ABCC12Q96J65 1359 aa23.37■■□□□ 1.33
HOXC4-201ENST00000303406 LRP5O75197 1615 aa23.37■■□□□ 1.33
HOXC4-201ENST00000303406 PDE8AO60658 829 aa23.37■■□□□ 1.33
HOXC4-201ENST00000303406 ZKSCAN1P17029 563 aaPredicted RBP23.37■■□□□ 1.33
HOXC4-201ENST00000303406 CRKLP46109 303 aaKnown RBP23.37■■□□□ 1.33
HOXC4-201ENST00000303406 CTSWP56202 376 aa23.37■■□□□ 1.33
HOXC4-201ENST00000303406 TTLL11Q8NHH1 800 aa23.37■■□□□ 1.33
HOXC4-201ENST00000303406 ACSBG1Q96GR2 724 aa23.37■■□□□ 1.33
HOXC4-201ENST00000303406 A0A1B0GUL7 405 aa23.36■■□□□ 1.33
HOXC4-201ENST00000303406 RGL2O15211 777 aa23.36■■□□□ 1.33
HOXC4-201ENST00000303406 GPTP24298 496 aa23.36■■□□□ 1.33
HOXC4-201ENST00000303406 ARXQ96QS3 562 aa23.36■■□□□ 1.33
HOXC4-201ENST00000303406 HMG20BQ9P0W2 317 aa23.36■■□□□ 1.33
HOXC4-201ENST00000303406 RBM8AQ9Y5S9 174 aaKnown RBP23.36■■□□□ 1.33
HOXC4-201ENST00000303406 SH3TC1Q8TE82 1336 aa23.36■■□□□ 1.33
HOXC4-201ENST00000303406 IRS4O14654 1257 aaPredicted RBP23.35■■□□□ 1.33
HOXC4-201ENST00000303406 SSFA2P28290 1259 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 TSGA10IPQ3SY00 556 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 PARP10Q53GL7 1025 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 TAF7LQ5H9L4 462 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 RNF20Q5VTR2 975 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 NEUROD6Q96NK8 337 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 PUS3Q9BZE2 481 aaKnown RBP23.35■■□□□ 1.33
HOXC4-201ENST00000303406 UPF3BQ9BZI7 483 aaKnown RBP23.35■■□□□ 1.33
HOXC4-201ENST00000303406 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 TRMT112Q9UI30 125 aaKnown RBP23.35■■□□□ 1.33
HOXC4-201ENST00000303406 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
HOXC4-201ENST00000303406 BCORQ6W2J9 1755 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 ANKRD18BA2A2Z9 1011 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 VPS53Q5VIR6 699 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 CREB3L3Q68CJ9 461 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 PRPF40BQ6NWY9 871 aaKnown RBP23.34■■□□□ 1.33
HOXC4-201ENST00000303406 NGLY1Q96IV0 654 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 RIC1Q4ADV7 1423 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 UBN2Q6ZU65 1347 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 LAMB2P55268 1798 aa23.34■■□□□ 1.33
HOXC4-201ENST00000303406 RPAP1Q9BWH6 1393 aaPredicted RBP23.34■■□□□ 1.33
HOXC4-201ENST00000303406 HSP90B1P14625 803 aaKnown RBP23.33■■□□□ 1.33
HOXC4-201ENST00000303406 ITPK1Q13572 414 aa23.33■■□□□ 1.33
HOXC4-201ENST00000303406 SKOR2Q2VWA4 1001 aaPredicted RBP23.33■■□□□ 1.33
HOXC4-201ENST00000303406 USPL1Q5W0Q7 1092 aa23.33■■□□□ 1.33
HOXC4-201ENST00000303406 ZGPATQ8N5A5 531 aaKnown RBP23.33■■□□□ 1.33
HOXC4-201ENST00000303406 PAG1Q9NWQ8 432 aa23.33■■□□□ 1.33
HOXC4-201ENST00000303406 TBC1D2BQ9UPU7 963 aa23.33■■□□□ 1.33
HOXC4-201ENST00000303406 TAF5LO75529 589 aa23.33■■□□□ 1.32
HOXC4-201ENST00000303406 CAMTA2O94983 1202 aa23.33■■□□□ 1.32
HOXC4-201ENST00000303406 PSMA5P28066 241 aa23.33■■□□□ 1.32
HOXC4-201ENST00000303406 TIMM10P62072 90 aa23.33■■□□□ 1.32
HOXC4-201ENST00000303406 DNAJC2Q99543 621 aaKnown RBP23.33■■□□□ 1.32
HOXC4-201ENST00000303406 HELLSQ9NRZ9 838 aa23.33■■□□□ 1.32
HOXC4-201ENST00000303406 RIPOR2Q9Y4F9 1068 aa23.33■■□□□ 1.32
HOXC4-201ENST00000303406 GOLGA6L22H0YM25 854 aa23.32■■□□□ 1.32
HOXC4-201ENST00000303406 TRAK2O60296 914 aa23.32■■□□□ 1.32
HOXC4-201ENST00000303406 ITGA6P23229 1130 aa23.32■■□□□ 1.32
HOXC4-201ENST00000303406 FAM98CQ17RN3 349 aaKnown RBP23.32■■□□□ 1.32
HOXC4-201ENST00000303406 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
HOXC4-201ENST00000303406 EDC3Q96F86 508 aaKnown RBP23.32■■□□□ 1.32
HOXC4-201ENST00000303406 C8orf37Q96NL8 207 aa23.32■■□□□ 1.32
HOXC4-201ENST00000303406 ALDH8A1Q9H2A2 487 aaPredicted RBP23.32■■□□□ 1.32
HOXC4-201ENST00000303406 MYH14Q7Z406 1995 aaKnown RBP23.31■■□□□ 1.32
HOXC4-201ENST00000303406 SLC27A2O14975 620 aa23.31■■□□□ 1.32
HOXC4-201ENST00000303406 IFIT1P09914 478 aaKnown RBP23.31■■□□□ 1.32
HOXC4-201ENST00000303406 KCNJ4P48050 445 aa23.31■■□□□ 1.32
HOXC4-201ENST00000303406 LRRFIP1Q32MZ4 808 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms