RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 STAP2Q9UGK3 403 aa15.96■□□□□ 0.15
CCDC7-202ENST00000302316 LAMB2P55268 1798 aa15.96■□□□□ 0.15
CCDC7-202ENST00000302316 IFIT2P09913 472 aaKnown RBP15.95■□□□□ 0.14
CCDC7-202ENST00000302316 HSP90B1P14625 803 aaKnown RBP15.95■□□□□ 0.14
CCDC7-202ENST00000302316 GREM2Q9H772 168 aa15.95■□□□□ 0.14
CCDC7-202ENST00000302316 AOX1Q06278 1338 aa15.95■□□□□ 0.14
CCDC7-202ENST00000302316 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
CCDC7-202ENST00000302316 SSFA2P28290 1259 aa15.95■□□□□ 0.14
CCDC7-202ENST00000302316 SETDB2Q96T68 719 aa15.95■□□□□ 0.14
CCDC7-202ENST00000302316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
CCDC7-202ENST00000302316 COL24A1Q17RW2 1714 aa15.95■□□□□ 0.14
CCDC7-202ENST00000302316 EYA2O00167 538 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 ITGA6P23229 1130 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 TFCP2Q12800 502 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 RGPD3A6NKT7 1758 aaPredicted RBP15.94■□□□□ 0.14
CCDC7-202ENST00000302316 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 CIAO1O76071 339 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 IL15P40933 162 aaPredicted RBP15.94■□□□□ 0.14
CCDC7-202ENST00000302316 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
CCDC7-202ENST00000302316 SDSP20132 328 aa15.93■□□□□ 0.14
CCDC7-202ENST00000302316 LRRC24Q50LG9 513 aa15.93■□□□□ 0.14
CCDC7-202ENST00000302316 ATG9AQ7Z3C6 839 aa15.93■□□□□ 0.14
CCDC7-202ENST00000302316 EAF2Q96CJ1 260 aaPredicted RBP15.93■□□□□ 0.14
CCDC7-202ENST00000302316 CDC45O75419 566 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 SEC24BO95487 1268 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 GTF2E1P29083 439 aaPredicted RBP15.92■□□□□ 0.14
CCDC7-202ENST00000302316 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 FBXO3Q9UK99 471 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 TTC41PQ6P2S7 1318 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 ERFEQ4G0M1 354 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 TNNI3KQ59H18 835 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 NBPF5PQ86XG9 351 aaPredicted RBP15.92■□□□□ 0.14
CCDC7-202ENST00000302316 PUS3Q9BZE2 481 aaKnown RBP15.92■□□□□ 0.14
CCDC7-202ENST00000302316 CCDC8Q9H0W5 538 aaPredicted RBP15.92■□□□□ 0.14
CCDC7-202ENST00000302316 FPGT-TNNI3KV9GXZ4 949 aa15.92■□□□□ 0.14
CCDC7-202ENST00000302316 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 CCDC152Q4G0S7 254 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 PI4K2BQ8TCG2 481 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 ECHDC1Q9NTX5 307 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 TLR7Q9NYK1 1049 aaKnown RBP15.91■□□□□ 0.14
CCDC7-202ENST00000302316 TFCP2L1Q9NZI6 479 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 CARMIL3Q8ND23 1372 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 ERC2O15083 957 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 TBC1D9Q6ZT07 1266 aa15.91■□□□□ 0.14
CCDC7-202ENST00000302316 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
CCDC7-202ENST00000302316 ABCC12Q96J65 1359 aa15.9■□□□□ 0.14
CCDC7-202ENST00000302316 TRIM6-TRIM34B2RNG4 842 aa15.9■□□□□ 0.14
CCDC7-202ENST00000302316 LRP5O75197 1615 aa15.9■□□□□ 0.14
CCDC7-202ENST00000302316 GLRX3O76003 335 aaKnown RBP15.89■□□□□ 0.13
CCDC7-202ENST00000302316 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 RTL9Q8NET4 1388 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 NPHP1O15259 732 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 GYS1P13807 737 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
CCDC7-202ENST00000302316 NFIXQ14938 502 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 LDHAL6AQ6ZMR3 332 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 GPR108Q9NPR9 543 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 CNNM1Q9NRU3 951 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 ZNF609O15014 1411 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 RIC1Q4ADV7 1423 aa15.89■□□□□ 0.13
CCDC7-202ENST00000302316 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
CCDC7-202ENST00000302316 CEP126Q9P2H0 1117 aa15.88■□□□□ 0.13
CCDC7-202ENST00000302316 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
CCDC7-202ENST00000302316 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
CCDC7-202ENST00000302316 MAP4K4O95819 1239 aaPredicted RBP15.87■□□□□ 0.13
CCDC7-202ENST00000302316 SLC10A5Q5PT55 438 aa15.87■□□□□ 0.13
CCDC7-202ENST00000302316 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
CCDC7-202ENST00000302316 CASZ1Q86V15 1759 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 EN1Q05925 392 aaPredicted RBP15.86■□□□□ 0.13
CCDC7-202ENST00000302316 METTL24Q5JXM2 366 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 C3orf67Q6ZVT6 689 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 NEUROD6Q96NK8 337 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 DBNDD2Q9BQY9 259 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 RIPOR2Q9Y4F9 1068 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 SF3B3Q15393 1217 aaKnown RBP15.86■□□□□ 0.13
CCDC7-202ENST00000302316 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
CCDC7-202ENST00000302316 CNTROBQ8N137 903 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 MPHOSPH8Q99549 860 aa15.86■□□□□ 0.13
CCDC7-202ENST00000302316 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 MSH5O43196 834 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
CCDC7-202ENST00000302316 CCDC24Q8N4L8 307 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 NLRP3Q96P20 1036 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 AKAP2Q9Y2D5 859 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 IGHMBP2P38935 993 aaKnown RBP15.85■□□□□ 0.13
CCDC7-202ENST00000302316 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 CAMKK2Q96RR4 588 aa15.85■□□□□ 0.13
CCDC7-202ENST00000302316 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
CCDC7-202ENST00000302316 TIMM10P62072 90 aa15.84■□□□□ 0.13
CCDC7-202ENST00000302316 COL23A1Q86Y22 540 aaPredicted RBP15.84■□□□□ 0.13
CCDC7-202ENST00000302316 MROH5Q6ZUA9 1318 aa15.84■□□□□ 0.13
CCDC7-202ENST00000302316 SPEF2Q9C093 1822 aa15.84■□□□□ 0.13
CCDC7-202ENST00000302316 AK9Q5TCS8 1911 aa15.84■□□□□ 0.13
CCDC7-202ENST00000302316 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.13
CCDC7-202ENST00000302316 EIF5BO60841 1220 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms