RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 TPCN1Q9ULQ1 816 aa28.72■■■□□ 2.19
FOXA3-201ENST00000302177 EPHA10Q5JZY3 1008 aa28.71■■■□□ 2.19
FOXA3-201ENST00000302177 COL18A1P39060 1754 aa28.71■■■□□ 2.19
FOXA3-201ENST00000302177 MEGF6O75095 1541 aa28.7■■■□□ 2.19
FOXA3-201ENST00000302177 RPS6KB1P23443 525 aa28.7■■■□□ 2.19
FOXA3-201ENST00000302177 KRT32Q14532 448 aa28.7■■■□□ 2.19
FOXA3-201ENST00000302177 TICAM2Q86XR7 235 aa28.7■■■□□ 2.18
FOXA3-201ENST00000302177 PTPN12Q05209 780 aaKnown RBP28.69■■■□□ 2.18
FOXA3-201ENST00000302177 USP16Q9Y5T5 823 aa28.69■■■□□ 2.18
FOXA3-201ENST00000302177 TNNI3KQ59H18 835 aa28.68■■■□□ 2.18
FOXA3-201ENST00000302177 FPGT-TNNI3KV9GXZ4 949 aa28.68■■■□□ 2.18
FOXA3-201ENST00000302177 FIBPO43427 364 aa28.68■■■□□ 2.18
FOXA3-201ENST00000302177 TAF5LO75529 589 aa28.68■■■□□ 2.18
FOXA3-201ENST00000302177 DNM1Q05193 864 aaKnown RBP28.68■■■□□ 2.18
FOXA3-201ENST00000302177 LARP1BQ659C4 914 aaKnown RBP28.68■■■□□ 2.18
FOXA3-201ENST00000302177 KLHDC4Q8TBB5 520 aa28.67■■■□□ 2.18
FOXA3-201ENST00000302177 PLBD2Q8NHP8 589 aa28.66■■■□□ 2.18
FOXA3-201ENST00000302177 DBNLQ9UJU6 430 aaKnown RBP28.66■■■□□ 2.18
FOXA3-201ENST00000302177 ELP1O95163 1332 aa28.66■■■□□ 2.18
FOXA3-201ENST00000302177 PKD1L3Q7Z443 1732 aa28.65■■■□□ 2.18
FOXA3-201ENST00000302177 NECAB1Q8N987 351 aa28.65■■■□□ 2.18
FOXA3-201ENST00000302177 FUCA2Q9BTY2 467 aa28.65■■■□□ 2.18
FOXA3-201ENST00000302177 CYP27B1O15528 508 aa28.64■■■□□ 2.18
FOXA3-201ENST00000302177 CSB-PGBD3P0DP91 1061 aa28.64■■■□□ 2.18
FOXA3-201ENST00000302177 KRT85P78386 507 aa28.64■■■□□ 2.17
FOXA3-201ENST00000302177 VPS37CA5D8V6 355 aaPredicted RBP28.63■■■□□ 2.17
FOXA3-201ENST00000302177 RRP9O43818 475 aaKnown RBP28.63■■■□□ 2.17
FOXA3-201ENST00000302177 TFCP2Q12800 502 aa28.63■■■□□ 2.17
FOXA3-201ENST00000302177 CASP7P55210 303 aa28.62■■■□□ 2.17
FOXA3-201ENST00000302177 TOB2Q14106 344 aaPredicted RBP28.62■■■□□ 2.17
FOXA3-201ENST00000302177 ZNF589Q86UQ0 364 aaPredicted RBP28.62■■■□□ 2.17
FOXA3-201ENST00000302177 U3KPZ7 1027 aaPredicted RBP28.62■■■□□ 2.17
FOXA3-201ENST00000302177 HAUS7Q99871 368 aa28.62■■■□□ 2.17
FOXA3-201ENST00000302177 PTMAP06454 111 aaKnown RBP28.61■■■□□ 2.17
FOXA3-201ENST00000302177 CABP4P57796 275 aa28.61■■■□□ 2.17
FOXA3-201ENST00000302177 UBE3BQ7Z3V4 1068 aa28.61■■■□□ 2.17
FOXA3-201ENST00000302177 A0A087WZG4 1122 aa28.61■■■□□ 2.17
FOXA3-201ENST00000302177 CPDO75976 1380 aa28.6■■■□□ 2.17
FOXA3-201ENST00000302177 DDX54Q8TDD1 881 aaKnown RBP28.6■■■□□ 2.17
FOXA3-201ENST00000302177 ARFGEF2Q9Y6D5 1785 aa28.6■■■□□ 2.17
FOXA3-201ENST00000302177 GPR108Q9NPR9 543 aa28.59■■■□□ 2.17
FOXA3-201ENST00000302177 TNS3Q68CZ2 1445 aa28.59■■■□□ 2.17
FOXA3-201ENST00000302177 MCMDC2Q4G0Z9 681 aa28.59■■■□□ 2.17
FOXA3-201ENST00000302177 SCAND2PQ9GZW5 306 aaPredicted RBP28.59■■■□□ 2.17
FOXA3-201ENST00000302177 AFDNP55196 1824 aaKnown RBP28.59■■■□□ 2.17
FOXA3-201ENST00000302177 LAMB4A4D0S4 1761 aa28.58■■■□□ 2.17
FOXA3-201ENST00000302177 PARP4Q9UKK3 1724 aaKnown RBP28.58■■■□□ 2.17
FOXA3-201ENST00000302177 H7C1W4 665 aa28.58■■■□□ 2.17
FOXA3-201ENST00000302177 KDM4AO75164 1064 aa28.58■■■□□ 2.17
FOXA3-201ENST00000302177 NEK1Q96PY6 1258 aa28.58■■■□□ 2.17
FOXA3-201ENST00000302177 HCLS1P14317 486 aaPredicted RBP28.57■■■□□ 2.16
FOXA3-201ENST00000302177 PHLPP1O60346 1717 aa28.57■■■□□ 2.16
FOXA3-201ENST00000302177 CDC37L1Q7L3B6 337 aa28.56■■■□□ 2.16
FOXA3-201ENST00000302177 KIAA2012Q0VF49 1180 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 TTC6Q86TZ1 520 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 EDC3Q96F86 508 aaKnown RBP28.55■■■□□ 2.16
FOXA3-201ENST00000302177 USP25Q9UHP3 1055 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 TAF6LQ9Y6J9 622 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 SH3TC1Q8TE82 1336 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 ADCY5O95622 1261 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 KBTBD3Q8NAB2 608 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 DBNDD2Q9BQY9 259 aa28.55■■■□□ 2.16
FOXA3-201ENST00000302177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.55■■■□□ 2.16
FOXA3-201ENST00000302177 GLI3P10071 1580 aa28.54■■■□□ 2.16
FOXA3-201ENST00000302177 HMGB1P09429 215 aaKnown RBP28.54■■■□□ 2.16
FOXA3-201ENST00000302177 CCDC192P0DO97 292 aa28.54■■■□□ 2.16
FOXA3-201ENST00000302177 FOXO4P98177 505 aa28.54■■■□□ 2.16
FOXA3-201ENST00000302177 COL9A3Q14050 684 aaPredicted RBP28.54■■■□□ 2.16
FOXA3-201ENST00000302177 HSP90AA2PQ14568 343 aaPredicted RBP28.54■■■□□ 2.16
FOXA3-201ENST00000302177 GIMAP6Q6P9H5 292 aa28.54■■■□□ 2.16
FOXA3-201ENST00000302177 ZNF609O15014 1411 aa28.54■■■□□ 2.16
FOXA3-201ENST00000302177 ATP5J2-PTCD1G3V325 749 aa28.53■■■□□ 2.16
FOXA3-201ENST00000302177 PTCD1O75127 700 aaKnown RBP28.53■■■□□ 2.16
FOXA3-201ENST00000302177 GTF3C6Q969F1 213 aa28.53■■■□□ 2.16
FOXA3-201ENST00000302177 SPATA31A3Q5VYP0 1347 aa28.53■■■□□ 2.16
FOXA3-201ENST00000302177 PALLDQ8WX93 1383 aa28.53■■■□□ 2.16
FOXA3-201ENST00000302177 LMBR1LQ6UX01 489 aa28.53■■■□□ 2.16
FOXA3-201ENST00000302177 HELLSQ9NRZ9 838 aa28.53■■■□□ 2.16
FOXA3-201ENST00000302177 AHDC1Q5TGY3 1603 aaPredicted RBP28.53■■■□□ 2.16
FOXA3-201ENST00000302177 JARID2Q92833 1246 aaPredicted RBP28.52■■■□□ 2.16
FOXA3-201ENST00000302177 R3HCC1Q9Y3T6 440 aaKnown RBP28.52■■■□□ 2.16
FOXA3-201ENST00000302177 TCEANC2Q96MN5 208 aa28.51■■■□□ 2.16
FOXA3-201ENST00000302177 LLPHQ9BRT6 129 aaKnown RBP28.51■■■□□ 2.15
FOXA3-201ENST00000302177 ATG3Q9NT62 314 aa28.51■■■□□ 2.15
FOXA3-201ENST00000302177 COL16A1Q07092 1604 aaPredicted RBP28.51■■■□□ 2.15
FOXA3-201ENST00000302177 PIP4K2AP48426 406 aaPredicted RBP28.5■■■□□ 2.15
FOXA3-201ENST00000302177 DNAJC2Q99543 621 aaKnown RBP28.5■■■□□ 2.15
FOXA3-201ENST00000302177 CWC25Q9NXE8 425 aaPredicted RBP28.5■■■□□ 2.15
FOXA3-201ENST00000302177 ERVV-2B6SEH9 535 aa28.5■■■□□ 2.15
FOXA3-201ENST00000302177 TPM3P06753 285 aa28.5■■■□□ 2.15
FOXA3-201ENST00000302177 CYP21A2P08686 494 aa28.5■■■□□ 2.15
FOXA3-201ENST00000302177 IL15P40933 162 aaPredicted RBP28.5■■■□□ 2.15
FOXA3-201ENST00000302177 CHRNA2Q15822 529 aa28.5■■■□□ 2.15
FOXA3-201ENST00000302177 CABLES1Q8TDN4 633 aa28.5■■■□□ 2.15
FOXA3-201ENST00000302177 SOS2Q07890 1332 aaPredicted RBP28.49■■■□□ 2.15
FOXA3-201ENST00000302177 NHSL1Q5SYE7 1610 aa28.49■■■□□ 2.15
FOXA3-201ENST00000302177 NBPF26B4DH59 902 aa28.49■■■□□ 2.15
FOXA3-201ENST00000302177 NBPF14Q5TI25 921 aa28.49■■■□□ 2.15
FOXA3-201ENST00000302177 NBPF10Q6P3W6 841 aaKnown RBP28.49■■■□□ 2.15
FOXA3-201ENST00000302177 ATG9AQ7Z3C6 839 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms