RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
CHAF1A-201ENST00000301280 USP25Q9UHP3 1055 aa18.63■□□□□ 0.57
CHAF1A-201ENST00000301280 TMEM94Q12767 1356 aa18.63■□□□□ 0.57
CHAF1A-201ENST00000301280 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
CHAF1A-201ENST00000301280 CUL4AQ13619 759 aa18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 PUS3Q9BZE2 481 aaKnown RBP18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 R3HCC1Q9Y3T6 440 aaKnown RBP18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
CHAF1A-201ENST00000301280 APPP05067 770 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 RAD50Q92878 1312 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 ME3Q16798 604 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 LRRC24Q50LG9 513 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 PPP1R9BQ96SB3 815 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 H3BQV1 296 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 ADAMTS2O95450 1211 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
CHAF1A-201ENST00000301280 WDR33Q9C0J8 1336 aaKnown RBP18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 JAK2O60674 1132 aa18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 DBNLQ9UJU6 430 aaKnown RBP18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 UTYO14607 1347 aa18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 A0A087WWV3 80 aa18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 EVI5LQ96CN4 794 aa18.6■□□□□ 0.57
CHAF1A-201ENST00000301280 TOMM22Q9NS69 142 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 NUTM2BA6NNL0 878 aaPredicted RBP18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 NUTM2EB1AL46 878 aaPredicted RBP18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 SNAP23O00161 211 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 NUTM2AQ8IVF1 878 aaPredicted RBP18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 BRF1Q92994 677 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 TPCN1Q9ULQ1 816 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 XIRP1Q702N8 1843 aaKnown RBP18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 MCM2P49736 904 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 PDIA6Q15084 440 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 FAM184AQ8NB25 1140 aa18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 NCOA5Q9HCD5 579 aaKnown RBP18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
CHAF1A-201ENST00000301280 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 BRD1O95696 1058 aa18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 VSIG10Q8N0Z9 540 aa18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 BICD2Q8TD16 824 aa18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 ERCC4Q92889 916 aaPredicted RBP18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 NUP188Q5SRE5 1749 aa18.58■□□□□ 0.57
CHAF1A-201ENST00000301280 ALDH1L1O75891 902 aa18.58■□□□□ 0.56
CHAF1A-201ENST00000301280 VPS53Q5VIR6 699 aa18.58■□□□□ 0.56
CHAF1A-201ENST00000301280 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.56
CHAF1A-201ENST00000301280 RRP9O43818 475 aaKnown RBP18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 DRC7Q8IY82 874 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 TSPY26PQ9H489 355 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 IQSEC3Q9UPP2 1182 aaPredicted RBP18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 TTLL5Q6EMB2 1281 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 INTS4Q96HW7 963 aaKnown RBP18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 DCCP43146 1447 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 ZNF445P59923 1031 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
CHAF1A-201ENST00000301280 SLC27A2O14975 620 aa18.56■□□□□ 0.56
CHAF1A-201ENST00000301280 KCNQ4P56696 695 aa18.56■□□□□ 0.56
CHAF1A-201ENST00000301280 ZSCAN22P10073 491 aaPredicted RBP18.56■□□□□ 0.56
CHAF1A-201ENST00000301280 CDC37L1Q7L3B6 337 aa18.56■□□□□ 0.56
CHAF1A-201ENST00000301280 ZMYND15Q9H091 742 aa18.56■□□□□ 0.56
CHAF1A-201ENST00000301280 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
CHAF1A-201ENST00000301280 OTUD7BQ6GQQ9 843 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 CCDC173Q0VFZ6 552 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 TNNI3KQ59H18 835 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 RNF20Q5VTR2 975 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 GPHNQ9NQX3 736 aaPredicted RBP18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 FPGT-TNNI3KV9GXZ4 949 aa18.55■□□□□ 0.56
CHAF1A-201ENST00000301280 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 RXRAP19793 462 aa18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 SMIM5Q71RC9 77 aa18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 TTC12Q9H892 705 aaPredicted RBP18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 TCHHQ07283 1943 aa18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
CHAF1A-201ENST00000301280 FTOQ9C0B1 505 aaKnown RBP eCLIP18.54■□□□□ 0.561e-7■□□□□ 8.2
CHAF1A-201ENST00000301280 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 IFIT1P09914 478 aaKnown RBP18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 NBPF14Q5TI25 921 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 Q6ZUG5 572 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 KCNB2Q92953 911 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
CHAF1A-201ENST00000301280 FAM13BQ9NYF5 915 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms