RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
CLPX-201ENST00000300107 VAMP4O75379 141 aa14.72□□□□□ -0.05
CLPX-201ENST00000300107 UBA7P41226 1012 aa14.72□□□□□ -0.05
CLPX-201ENST00000300107 AK2P54819 239 aa14.72□□□□□ -0.05
CLPX-201ENST00000300107 CKAP4Q07065 602 aaKnown RBP14.72□□□□□ -0.05
CLPX-201ENST00000300107 ZFP91Q96JP5 570 aaPredicted RBP14.72□□□□□ -0.05
CLPX-201ENST00000300107 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
CLPX-201ENST00000300107 KLF18A0A0U1RQI7 1052 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 MATR3P43243 847 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLPX-201ENST00000300107 BBXQ8WY36 941 aaPredicted RBP14.71□□□□□ -0.05
CLPX-201ENST00000300107 TESK2Q96S53 571 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 LRRC2Q9BYS8 371 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 SNRKQ9NRH2 765 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 ZNF76P36508 570 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 SPAG1Q07617 926 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 RAB11FIP4Q86YS3 637 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 GSTTP1A0A1W2PQM5 241 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 GCOM1H8Y6P7 765 aaPredicted RBP14.71□□□□□ -0.05
CLPX-201ENST00000300107 PER1O15534 1290 aaPredicted RBP14.71□□□□□ -0.05
CLPX-201ENST00000300107 AKR1B10O60218 316 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 MYZAPP0CAP1 466 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 CAPN2P17655 700 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 ZNF445P59923 1031 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 MAATS1Q7Z4T9 603 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 CATIPQ7Z7H3 387 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 MKNK2Q9HBH9 465 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 GOPCQ9HD26 462 aa14.71□□□□□ -0.05
CLPX-201ENST00000300107 SSR1P43307 286 aaKnown RBP14.71□□□□□ -0.06
CLPX-201ENST00000300107 RBM5P52756 815 aaKnown RBP eCLIP14.71□□□□□ -0.06
CLPX-201ENST00000300107 CHRNA2Q15822 529 aa14.71□□□□□ -0.06
CLPX-201ENST00000300107 CEP85Q6P2H3 762 aa14.71□□□□□ -0.06
CLPX-201ENST00000300107 CCDC144CPQ8IYA2 1237 aa14.71□□□□□ -0.06
CLPX-201ENST00000300107 CTAGE1Q96RT6 745 aa14.71□□□□□ -0.06
CLPX-201ENST00000300107 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.71□□□□□ -0.06
CLPX-201ENST00000300107 FANCAO15360 1455 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 SLC26A6Q9BXS9 759 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 TCP11L1Q9NUJ3 509 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.7□□□□□ -0.061e-8■□□□□ 8.2
CLPX-201ENST00000300107 HSP90AA4PQ58FG1 418 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 DDX46Q7L014 1031 aaKnown RBP14.7□□□□□ -0.06
CLPX-201ENST00000300107 UBE3BQ7Z3V4 1068 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 FAM114A1Q8IWE2 563 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 CEP112Q8N8E3 955 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 GOLGA1Q92805 767 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 TMEM266Q2M3C6 531 aa14.7□□□□□ -0.06
CLPX-201ENST00000300107 TMCO5BA8MYB1 307 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 IDEP14735 1019 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 TUBB4BP68371 445 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 AMPD3Q01432 767 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 DENND4BO75064 1496 aaPredicted RBP14.69□□□□□ -0.06
CLPX-201ENST00000300107 PIK3C2GO75747 1445 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 CYLC1P35663 651 aaPredicted RBP14.69□□□□□ -0.06
CLPX-201ENST00000300107 KRT28Q7Z3Y7 464 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 HSF2BPO75031 334 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 ANXA1P04083 346 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 TRIM21P19474 475 aaKnown RBP14.69□□□□□ -0.06
CLPX-201ENST00000300107 GTF2A1P52655 376 aaPredicted RBP14.69□□□□□ -0.06
CLPX-201ENST00000300107 SYT10Q6XYQ8 523 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 Q6ZUG5 572 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 TICAM2Q86XR7 235 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 ALG1Q9BT22 464 aa14.69□□□□□ -0.06
CLPX-201ENST00000300107 SPTLC2O15270 562 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 CHMLP26374 656 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 CAVIN4Q5BKX8 364 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 CCDC91Q7Z6B0 441 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 NGLY1Q96IV0 654 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 SPECC1LQ69YQ0 1117 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 TTF1Q15361 905 aaPredicted RBP14.68□□□□□ -0.06
CLPX-201ENST00000300107 ZSCAN29Q8IWY8 852 aaPredicted RBP14.68□□□□□ -0.06
CLPX-201ENST00000300107 TRIM47Q96LD4 638 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
CLPX-201ENST00000300107 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 PRAG1Q86YV5 1406 aa14.68□□□□□ -0.06
CLPX-201ENST00000300107 ACEP12821 1306 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 CCDC40Q4G0X9 1142 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 CTAGE9A4FU28 777 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 BMP15O95972 392 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 SLC5A1P13866 664 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 MARCKSP29966 332 aaPredicted RBP14.67□□□□□ -0.06
CLPX-201ENST00000300107 MYRIPQ8NFW9 859 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 ERO1AQ96HE7 468 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 UBA5Q9GZZ9 404 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 NUP160Q12769 1436 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 TUBBP07437 444 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 MCMDC2Q4G0Z9 681 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 RMND1Q9NWS8 449 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 IFNKQ9P0W0 207 aa14.67□□□□□ -0.06
CLPX-201ENST00000300107 ANKRD18BA2A2Z9 1011 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 ZBTB43O43298 467 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 ZBTB3Q9H5J0 574 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 LDHAL6AQ6ZMR3 332 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 MFSD6Q6ZSS7 791 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 CALML4Q96GE6 196 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 KIF14Q15058 1648 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 TTC41PQ6P2S7 1318 aa14.66□□□□□ -0.06
CLPX-201ENST00000300107 ATP5J2-PTCD1G3V325 749 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms