RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 FAM47CQ5HY64 1035 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 FNBP4Q8N3X1 1017 aaPredicted RBP8.26□□□□□ -1.09
RAG1-201ENST00000299440 UPF3BQ9BZI7 483 aaKnown RBP8.26□□□□□ -1.09
RAG1-201ENST00000299440 ZMYND15Q9H091 742 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 ECHDC1Q9NTX5 307 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 TRPM2O94759 1503 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 MKRN3Q13064 507 aaKnown RBP8.26□□□□□ -1.09
RAG1-201ENST00000299440 CWF19L2Q2TBE0 894 aaKnown RBP8.26□□□□□ -1.09
RAG1-201ENST00000299440 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 MAGEB6Q8N7X4 407 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 HOOK2Q96ED9 719 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
RAG1-201ENST00000299440 GRM8O00222 908 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 TRAF1Q13077 416 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 CALML4Q96GE6 196 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 SLC26A6Q9BXS9 759 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 SH2D4AQ9H788 454 aa8.26□□□□□ -1.09
RAG1-201ENST00000299440 SPDYE3A6NKU9 549 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 ZSCAN31Q96LW9 406 aaPredicted RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 CSPG5O95196 566 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 WTAPQ15007 396 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 KSR2Q6VAB6 950 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 TNMDQ9H2S6 317 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 PTPRCP08575 1304 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 SH3TC1Q8TE82 1336 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 TBCAO75347 108 aaKnown RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 A1BGP04217 495 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 SEPT7Q16181 437 aaKnown RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 PARP10Q53GL7 1025 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 CHST3Q7LGC8 479 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 ABCC2Q92887 1545 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 YTHDC2Q9H6S0 1430 aaKnown RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 ANKRD36BQ8N2N9 1353 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 SBNO2Q9Y2G9 1366 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 PHACTR2O75167 634 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 ZBTB7AO95365 584 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 HIBADHP31937 336 aaKnown RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 KCNQ4P56696 695 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 GADL1Q6ZQY3 521 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 TCP11L1Q9NUJ3 509 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 GPATCH8Q9UKJ3 1502 aaKnown RBP8.25□□□□□ -1.09
RAG1-201ENST00000299440 HOMER2Q9NSB8 354 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
RAG1-201ENST00000299440 ABCC11Q96J66 1382 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 NAPAP54920 295 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 CCDC174Q6PII3 467 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 CPXCR1Q8N123 301 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 ESR2Q92731 530 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 TNNT1P13805 278 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 IL15P40933 162 aaPredicted RBP8.24□□□□□ -1.09
RAG1-201ENST00000299440 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
RAG1-201ENST00000299440 ALDH1L2Q3SY69 923 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 CAVIN1Q6NZI2 390 aaKnown RBP8.24□□□□□ -1.09
RAG1-201ENST00000299440 RAPGEF6Q8TEU7 1601 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 MAP3K19Q56UN5 1328 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 METAP2P50579 478 aaKnown RBP eCLIP8.24□□□□□ -1.09
RAG1-201ENST00000299440 OTUD7BQ6GQQ9 843 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 TTC6Q86TZ1 520 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 EVI5LQ96CN4 794 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 PA2G4Q9UQ80 394 aaKnown RBP8.24□□□□□ -1.09
RAG1-201ENST00000299440 USP16Q9Y5T5 823 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 DOK7Q18PE1 504 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 AKNAD1Q5T1N1 836 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 NCOA7Q8NI08 942 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 SPC25Q9HBM1 224 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 CFAP45Q9UL16 551 aa8.24□□□□□ -1.09
RAG1-201ENST00000299440 PTPDC1A2A3K4 754 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 NOP56O00567 594 aaKnown RBP8.23□□□□□ -1.09
RAG1-201ENST00000299440 ARHGEF6Q15052 776 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 USP48Q86UV5 1035 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 STXBP4Q6ZWJ1 553 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 ERMNQ8TAM6 284 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 PANK2Q9BZ23 570 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 ITGA6P23229 1130 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 CETN2P41208 172 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 SLFN5Q08AF3 891 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 PHAXQ9H814 394 aaKnown RBP8.23□□□□□ -1.09
RAG1-201ENST00000299440 CIZ1Q9ULV3 898 aaPredicted RBP8.23□□□□□ -1.09
RAG1-201ENST00000299440 NSD2O96028 1365 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 TAF5LO75529 589 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 HMGB1P09429 215 aaKnown RBP8.23□□□□□ -1.09
RAG1-201ENST00000299440 SYNCQ9H7C4 482 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 AFF2P51816 1311 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
RAG1-201ENST00000299440 MAP3K5Q99683 1374 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 CETN1Q12798 172 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 CACNA2D4Q7Z3S7 1137 aa8.23□□□□□ -1.09
RAG1-201ENST00000299440 DUOX2Q9NRD8 1548 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 LTKP29376 864 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
RAG1-201ENST00000299440 GPCPD1Q9NPB8 672 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 ABCC1P33527 1531 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 TCP10L2B9ZVM9 353 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 PRC1O43663 620 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 GTF2IP78347 998 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms