RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 ELP1O95163 1332 aa16.66■□□□□ 0.26
CCT2-201ENST00000299300 CYP27B1O15528 508 aa16.65■□□□□ 0.26
CCT2-201ENST00000299300 KCNJ4P48050 445 aa16.65■□□□□ 0.26
CCT2-201ENST00000299300 TAF6LQ9Y6J9 622 aa16.65■□□□□ 0.26
CCT2-201ENST00000299300 UBR2Q8IWV8 1755 aa16.65■□□□□ 0.26
CCT2-201ENST00000299300 RRP9O43818 475 aaKnown RBP16.65■□□□□ 0.26
CCT2-201ENST00000299300 PDCP20941 246 aa16.65■□□□□ 0.26
CCT2-201ENST00000299300 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
CCT2-201ENST00000299300 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
CCT2-201ENST00000299300 TJP1Q07157 1748 aa16.64■□□□□ 0.25
CCT2-201ENST00000299300 TICAM2Q86XR7 235 aa16.64■□□□□ 0.25
CCT2-201ENST00000299300 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
CCT2-201ENST00000299300 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
CCT2-201ENST00000299300 KRT32Q14532 448 aa16.63■□□□□ 0.25
CCT2-201ENST00000299300 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
CCT2-201ENST00000299300 TFCP2Q12800 502 aa16.63■□□□□ 0.25
CCT2-201ENST00000299300 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
CCT2-201ENST00000299300 HAUS7Q99871 368 aa16.63■□□□□ 0.25
CCT2-201ENST00000299300 CPDO75976 1380 aa16.63■□□□□ 0.25
CCT2-201ENST00000299300 ZNF609O15014 1411 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 LAMA4Q16363 1823 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 TTC6Q86TZ1 520 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
CCT2-201ENST00000299300 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 VPS37CA5D8V6 355 aaPredicted RBP16.62■□□□□ 0.25
CCT2-201ENST00000299300 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
CCT2-201ENST00000299300 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 TTC5Q8N0Z6 440 aa16.62■□□□□ 0.25
CCT2-201ENST00000299300 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
CCT2-201ENST00000299300 H7C1W4 665 aa16.61■□□□□ 0.25
CCT2-201ENST00000299300 KDM4AO75164 1064 aa16.61■□□□□ 0.25
CCT2-201ENST00000299300 KRT85P78386 507 aa16.61■□□□□ 0.25
CCT2-201ENST00000299300 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
CCT2-201ENST00000299300 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 USP25Q9UHP3 1055 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 FOXO4P98177 505 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 DBNDD2Q9BQY9 259 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 SPEF2Q9C093 1822 aa16.6■□□□□ 0.25
CCT2-201ENST00000299300 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
CCT2-201ENST00000299300 DTNBO60941 627 aa16.59■□□□□ 0.25
CCT2-201ENST00000299300 ADCY5O95622 1261 aa16.59■□□□□ 0.25
CCT2-201ENST00000299300 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
CCT2-201ENST00000299300 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
CCT2-201ENST00000299300 A0A087WZG4 1122 aa16.58■□□□□ 0.25
CCT2-201ENST00000299300 MCMDC2Q4G0Z9 681 aa16.58■□□□□ 0.25
CCT2-201ENST00000299300 GTF3C6Q969F1 213 aa16.58■□□□□ 0.25
CCT2-201ENST00000299300 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.25
CCT2-201ENST00000299300 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.25
CCT2-201ENST00000299300 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 PTMAP06454 111 aaKnown RBP16.58■□□□□ 0.24
CCT2-201ENST00000299300 ATF3P18847 181 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 KIAA2012Q0VF49 1180 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
CCT2-201ENST00000299300 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 KBTBD3Q8NAB2 608 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
CCT2-201ENST00000299300 PIP4K2AP48426 406 aaPredicted RBP16.57■□□□□ 0.24
CCT2-201ENST00000299300 CABP4P57796 275 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 HSP90AA2PQ14568 343 aaPredicted RBP16.57■□□□□ 0.24
CCT2-201ENST00000299300 RBM43Q6ZSC3 357 aaKnown RBP16.57■□□□□ 0.24
CCT2-201ENST00000299300 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 UBE2Q2Q8WVN8 375 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 SCAND2PQ9GZW5 306 aaPredicted RBP16.57■□□□□ 0.24
CCT2-201ENST00000299300 KCPQ6ZWJ8 1503 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
CCT2-201ENST00000299300 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
CCT2-201ENST00000299300 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
CCT2-201ENST00000299300 CYP21A2P08686 494 aa16.56■□□□□ 0.24
CCT2-201ENST00000299300 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
CCT2-201ENST00000299300 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
CCT2-201ENST00000299300 PIBF1Q8WXW3 757 aa16.56■□□□□ 0.24
CCT2-201ENST00000299300 AP5Z1O43299 807 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 LIG1P18858 919 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 RESTQ13127 1097 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 CHRNA2Q15822 529 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 FAM173BQ6P4H8 233 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 SASS6Q6UVJ0 657 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 FERMT3Q86UX7 667 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
CCT2-201ENST00000299300 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
CCT2-201ENST00000299300 SEC62Q99442 399 aaKnown RBP16.55■□□□□ 0.24
CCT2-201ENST00000299300 LLPHQ9BRT6 129 aaKnown RBP16.55■□□□□ 0.24
CCT2-201ENST00000299300 SHANK3Q9BYB0 1731 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 STOX1Q6ZVD7 989 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 DSCC1Q9BVC3 393 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 NUP62CLQ9H1M0 184 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
CCT2-201ENST00000299300 PFKFB2O60825 505 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms