RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ADAMTSL3P82987 1691 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
BCCIP-202ENST00000299130 PSMA5P28066 241 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
BCCIP-202ENST00000299130 JCADQ9P266 1359 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 KIF1AQ12756 1690 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 ATP5JP18859 108 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 MCM5P33992 734 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 UVSSAQ2YD98 709 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 MST1RQ04912 1400 aa16.24■□□□□ 0.19
BCCIP-202ENST00000299130 COL18A1P39060 1754 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 A0A087WZG4 1122 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 AP5Z1O43299 807 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 ADCY5O95622 1261 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
BCCIP-202ENST00000299130 CHMP3Q9Y3E7 222 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
BCCIP-202ENST00000299130 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
BCCIP-202ENST00000299130 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
BCCIP-202ENST00000299130 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
BCCIP-202ENST00000299130 SLFNL1Q499Z3 407 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 ZNF609O15014 1411 aa16.23■□□□□ 0.19
BCCIP-202ENST00000299130 CASP7P55210 303 aa16.22■□□□□ 0.19
BCCIP-202ENST00000299130 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
BCCIP-202ENST00000299130 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
BCCIP-202ENST00000299130 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
BCCIP-202ENST00000299130 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
BCCIP-202ENST00000299130 LIG1P18858 919 aa16.21■□□□□ 0.19
BCCIP-202ENST00000299130 DDX46Q7L014 1031 aaKnown RBP16.21■□□□□ 0.19
BCCIP-202ENST00000299130 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
BCCIP-202ENST00000299130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.199e-7■■□□□ 13.9
BCCIP-202ENST00000299130 TFIP11Q9UBB9 837 aaKnown RBP16.21■□□□□ 0.19
BCCIP-202ENST00000299130 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.19
BCCIP-202ENST00000299130 JAK2O60674 1132 aa16.2■□□□□ 0.18
BCCIP-202ENST00000299130 LMBR1LQ6UX01 489 aa16.2■□□□□ 0.18
BCCIP-202ENST00000299130 KDM4AO75164 1064 aa16.2■□□□□ 0.18
BCCIP-202ENST00000299130 CABP4P57796 275 aa16.2■□□□□ 0.18
BCCIP-202ENST00000299130 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
BCCIP-202ENST00000299130 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
BCCIP-202ENST00000299130 TTC12Q9H892 705 aaPredicted RBP16.2■□□□□ 0.18
BCCIP-202ENST00000299130 GLI3P10071 1580 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 NBPF26B4DH59 902 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 RRP9O43818 475 aaKnown RBP16.19■□□□□ 0.18
BCCIP-202ENST00000299130 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 NBPF10Q6P3W6 841 aaKnown RBP16.19■□□□□ 0.18
BCCIP-202ENST00000299130 C17orf53Q8N3J3 647 aaPredicted RBP16.19■□□□□ 0.18
BCCIP-202ENST00000299130 NBPF15Q8N660 670 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 CYP21A2P08686 494 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 KRT85P78386 507 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 CAMK4Q16566 473 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 HAUS7Q99871 368 aa16.19■□□□□ 0.18
BCCIP-202ENST00000299130 RBM10P98175 930 aaKnown RBP16.18■□□□□ 0.18
BCCIP-202ENST00000299130 FOXO4P98177 505 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 ATF3P18847 181 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 TERF1P54274 439 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 TTLL7Q6ZT98 887 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 Q6ZUG5 572 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 STOX1Q6ZVD7 989 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
BCCIP-202ENST00000299130 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 ATG9AQ7Z3C6 839 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 DDX11Q96FC9 970 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 TMEM94Q12767 1356 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 PDCP20941 246 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 TIMM10P62072 90 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 GTF3C6Q969F1 213 aa16.17■□□□□ 0.18
BCCIP-202ENST00000299130 UQCRHLA0A096LP55 91 aa16.16■□□□□ 0.18
BCCIP-202ENST00000299130 UQCRHP07919 91 aa16.16■□□□□ 0.18
BCCIP-202ENST00000299130 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
BCCIP-202ENST00000299130 PKD1L3Q7Z443 1732 aa16.16■□□□□ 0.18
BCCIP-202ENST00000299130 H7C1W4 665 aa16.16■□□□□ 0.18
BCCIP-202ENST00000299130 ELP1O95163 1332 aa16.15■□□□□ 0.18
BCCIP-202ENST00000299130 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
BCCIP-202ENST00000299130 LEO1Q8WVC0 666 aaPredicted RBP16.15■□□□□ 0.18
BCCIP-202ENST00000299130 BRF1Q92994 677 aa16.15■□□□□ 0.18
BCCIP-202ENST00000299130 ZNF594Q96JF6 807 aaPredicted RBP16.15■□□□□ 0.18
BCCIP-202ENST00000299130 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
BCCIP-202ENST00000299130 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
BCCIP-202ENST00000299130 GOLIM4O00461 696 aa16.14■□□□□ 0.18
BCCIP-202ENST00000299130 A1BGP04217 495 aa16.14■□□□□ 0.18
BCCIP-202ENST00000299130 HSP90B1P14625 803 aaKnown RBP16.14■□□□□ 0.18
BCCIP-202ENST00000299130 KRT32Q14532 448 aa16.14■□□□□ 0.18
BCCIP-202ENST00000299130 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.18
BCCIP-202ENST00000299130 DACT1Q9NYF0 836 aa16.14■□□□□ 0.18
BCCIP-202ENST00000299130 MRVI1Q9Y6F6 885 aa16.14■□□□□ 0.18
BCCIP-202ENST00000299130 SCRN1Q12765 414 aa16.14■□□□□ 0.17
BCCIP-202ENST00000299130 LRRC24Q50LG9 513 aa16.14■□□□□ 0.17
BCCIP-202ENST00000299130 PGBD1Q96JS3 809 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms