RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 G3BP1Q13283 466 aaKnown RBP eCLIP30.46■■■□□ 2.47
GTF2A1-201ENST00000298173 ERFEQ4G0M1 354 aa30.46■■■□□ 2.47
GTF2A1-201ENST00000298173 ZBTB47Q9UFB7 747 aaPredicted RBP30.46■■■□□ 2.47
GTF2A1-201ENST00000298173 TPTE2Q6XPS3 522 aa30.46■■■□□ 2.47
GTF2A1-201ENST00000298173 ERC1Q8IUD2 1116 aa30.46■■■□□ 2.47
GTF2A1-201ENST00000298173 CARMIL3Q8ND23 1372 aa30.45■■■□□ 2.47
GTF2A1-201ENST00000298173 QSER1Q2KHR3 1735 aa30.45■■■□□ 2.46
GTF2A1-201ENST00000298173 SASH1O94885 1247 aa30.45■■■□□ 2.46
GTF2A1-201ENST00000298173 FAM161AQ3B820 660 aa30.45■■■□□ 2.46
GTF2A1-201ENST00000298173 CCDC57Q2TAC2 916 aa30.44■■■□□ 2.46
GTF2A1-201ENST00000298173 NBPF5PQ86XG9 351 aaPredicted RBP30.44■■■□□ 2.46
GTF2A1-201ENST00000298173 PLEKHM2Q8IWE5 1019 aa30.43■■■□□ 2.46
GTF2A1-201ENST00000298173 GREM2Q9H772 168 aa30.43■■■□□ 2.46
GTF2A1-201ENST00000298173 SIL1Q9H173 461 aa30.42■■■□□ 2.46
GTF2A1-201ENST00000298173 IFIT5Q13325 482 aaKnown RBP30.42■■■□□ 2.46
GTF2A1-201ENST00000298173 OS9Q13438 667 aaPredicted RBP30.42■■■□□ 2.46
GTF2A1-201ENST00000298173 CCDC85AQ96PX6 553 aaPredicted RBP30.42■■■□□ 2.46
GTF2A1-201ENST00000298173 STK32BQ9NY57 414 aa30.42■■■□□ 2.46
GTF2A1-201ENST00000298173 ITGA6P23229 1130 aa30.41■■■□□ 2.46
GTF2A1-201ENST00000298173 OTUD7AQ8TE49 926 aaPredicted RBP30.41■■■□□ 2.46
GTF2A1-201ENST00000298173 ZNF594Q96JF6 807 aaPredicted RBP30.41■■■□□ 2.46
GTF2A1-201ENST00000298173 IL1RAPL2Q9NP60 686 aa30.41■■■□□ 2.46
GTF2A1-201ENST00000298173 FBXO3Q9UK99 471 aa30.41■■■□□ 2.46
GTF2A1-201ENST00000298173 SALL3Q9BXA9 1300 aa30.4■■■□□ 2.46
GTF2A1-201ENST00000298173 ATG9AQ7Z3C6 839 aa30.4■■■□□ 2.46
GTF2A1-201ENST00000298173 NLGN1Q8N2Q7 840 aa30.4■■■□□ 2.46
GTF2A1-201ENST00000298173 RTL9Q8NET4 1388 aa30.4■■■□□ 2.46
GTF2A1-201ENST00000298173 ABCC12Q96J65 1359 aa30.4■■■□□ 2.46
GTF2A1-201ENST00000298173 GTF2E1P29083 439 aaPredicted RBP30.39■■■□□ 2.46
GTF2A1-201ENST00000298173 SF3B3Q15393 1217 aaKnown RBP30.39■■■□□ 2.46
GTF2A1-201ENST00000298173 CASZ1Q86V15 1759 aa30.39■■■□□ 2.46
GTF2A1-201ENST00000298173 CIAO1O76071 339 aa30.39■■■□□ 2.45
GTF2A1-201ENST00000298173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.39■■■□□ 2.45
GTF2A1-201ENST00000298173 ANKRD18BA2A2Z9 1011 aa30.38■■■□□ 2.45
GTF2A1-201ENST00000298173 EYA2O00167 538 aa30.38■■■□□ 2.45
GTF2A1-201ENST00000298173 CCDC152Q4G0S7 254 aa30.37■■■□□ 2.45
GTF2A1-201ENST00000298173 OSBPL3Q9H4L5 887 aa30.37■■■□□ 2.45
GTF2A1-201ENST00000298173 DDR1Q08345 913 aa30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 C3orf67Q6ZVT6 689 aa30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 POLRMTO00411 1230 aaKnown RBP30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 MSH5O43196 834 aa30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 SERPINB2P05120 415 aa30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 IL15P40933 162 aaPredicted RBP30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 LRRC24Q50LG9 513 aa30.36■■■□□ 2.45
GTF2A1-201ENST00000298173 PRR5LQ6MZQ0 368 aa30.35■■■□□ 2.45
GTF2A1-201ENST00000298173 CLASRPQ8N2M8 674 aaKnown RBP30.35■■■□□ 2.45
GTF2A1-201ENST00000298173 PUS3Q9BZE2 481 aaKnown RBP30.35■■■□□ 2.45
GTF2A1-201ENST00000298173 STAP2Q9UGK3 403 aa30.34■■■□□ 2.45
GTF2A1-201ENST00000298173 PDE1AP54750 535 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 CNBD1Q8NA66 436 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 NLRP3Q96P20 1036 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 BCL11AQ9H165 835 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 RIC1Q4ADV7 1423 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 TFCP2Q12800 502 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 SEC31BQ9NQW1 1179 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 RIPOR2Q9Y4F9 1068 aa30.33■■■□□ 2.45
GTF2A1-201ENST00000298173 CCDC24Q8N4L8 307 aa30.32■■■□□ 2.44
GTF2A1-201ENST00000298173 EAF2Q96CJ1 260 aaPredicted RBP30.32■■■□□ 2.44
GTF2A1-201ENST00000298173 TAF7LQ5H9L4 462 aa30.31■■■□□ 2.44
GTF2A1-201ENST00000298173 NRXN2Q9P2S2 1712 aa30.31■■■□□ 2.44
GTF2A1-201ENST00000298173 MX1P20591 662 aa30.3■■■□□ 2.44
GTF2A1-201ENST00000298173 UPF1Q92900 1129 aaKnown RBP eCLIP30.3■■■□□ 2.44
GTF2A1-201ENST00000298173 LRP5O75197 1615 aa30.3■■■□□ 2.44
GTF2A1-201ENST00000298173 BMP2KLQ5H9B9 411 aa30.3■■■□□ 2.44
GTF2A1-201ENST00000298173 LDHAL6AQ6ZMR3 332 aa30.3■■■□□ 2.44
GTF2A1-201ENST00000298173 GPR108Q9NPR9 543 aa30.3■■■□□ 2.44
GTF2A1-201ENST00000298173 TNRC6CQ9HCJ0 1690 aaKnown RBP30.29■■■□□ 2.44
GTF2A1-201ENST00000298173 TNNI3KQ59H18 835 aa30.27■■■□□ 2.44
GTF2A1-201ENST00000298173 TTC22Q5TAA0 569 aa30.27■■■□□ 2.44
GTF2A1-201ENST00000298173 AACSQ86V21 672 aa30.27■■■□□ 2.44
GTF2A1-201ENST00000298173 FPGT-TNNI3KV9GXZ4 949 aa30.27■■■□□ 2.44
GTF2A1-201ENST00000298173 NPHP1O15259 732 aa30.27■■■□□ 2.44
GTF2A1-201ENST00000298173 TAF1P21675 1872 aa30.26■■■□□ 2.43
GTF2A1-201ENST00000298173 AOX1Q06278 1338 aa30.26■■■□□ 2.43
GTF2A1-201ENST00000298173 ST5P78524 1137 aa30.26■■■□□ 2.43
GTF2A1-201ENST00000298173 COL4A1P02462 1669 aa30.26■■■□□ 2.43
GTF2A1-201ENST00000298173 MMP10P09238 476 aa30.25■■■□□ 2.43
GTF2A1-201ENST00000298173 IFIT2P09913 472 aaKnown RBP30.25■■■□□ 2.43
GTF2A1-201ENST00000298173 GSPT1P15170 499 aaKnown RBP30.25■■■□□ 2.43
GTF2A1-201ENST00000298173 C8orf34Q49A92 452 aa30.25■■■□□ 2.43
GTF2A1-201ENST00000298173 CEP126Q9P2H0 1117 aa30.25■■■□□ 2.43
GTF2A1-201ENST00000298173 CDC5LQ99459 802 aaKnown RBP30.24■■■□□ 2.43
GTF2A1-201ENST00000298173 BACH2Q9BYV9 841 aa30.24■■■□□ 2.43
GTF2A1-201ENST00000298173 CNNM1Q9NRU3 951 aa30.24■■■□□ 2.43
GTF2A1-201ENST00000298173 KLRG2A4D1S0 409 aaPredicted RBP30.23■■■□□ 2.43
GTF2A1-201ENST00000298173 PDGFDQ9GZP0 370 aaPredicted RBP30.23■■■□□ 2.43
GTF2A1-201ENST00000298173 CCDC8Q9H0W5 538 aaPredicted RBP30.23■■■□□ 2.43
GTF2A1-201ENST00000298173 TTC41PQ6P2S7 1318 aa30.23■■■□□ 2.43
GTF2A1-201ENST00000298173 CRY2Q49AN0 593 aa30.23■■■□□ 2.43
GTF2A1-201ENST00000298173 VGLL2Q8N8G2 317 aa30.23■■■□□ 2.43
GTF2A1-201ENST00000298173 IGHMBP2P38935 993 aaKnown RBP30.22■■■□□ 2.43
GTF2A1-201ENST00000298173 TSHZ3Q63HK5 1081 aa30.22■■■□□ 2.43
GTF2A1-201ENST00000298173 MSL1Q68DK7 614 aa30.22■■■□□ 2.43
GTF2A1-201ENST00000298173 PI4K2BQ8TCG2 481 aa30.22■■■□□ 2.43
GTF2A1-201ENST00000298173 MPHOSPH8Q99549 860 aa30.22■■■□□ 2.43
GTF2A1-201ENST00000298173 PARP3Q9Y6F1 533 aa30.22■■■□□ 2.43
GTF2A1-201ENST00000298173 TLR7Q9NYK1 1049 aaKnown RBP30.21■■■□□ 2.43
GTF2A1-201ENST00000298173 SPEF2Q9C093 1822 aa30.21■■■□□ 2.43
GTF2A1-201ENST00000298173 CELF1Q92879 486 aaKnown RBP30.2■■■□□ 2.43
GTF2A1-201ENST00000298173 DBNLQ9UJU6 430 aaKnown RBP30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms