RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CCDC148Q8NFR7 591 aa7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 CTNNBL1Q8WYA6 563 aaPredicted RBP7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.98□□□□□ -1.13
GAPVD1-202ENST00000297933 FLT4P35916 1363 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 GPATCH8Q9UKJ3 1502 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 GRM8O00222 908 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 MCM5P33992 734 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 UBA7P41226 1012 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 ALDH1L1O75891 902 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 RAB11FIP4Q86YS3 637 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 NEK1Q96PY6 1258 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 WDR97A6NE52 1622 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 EIF4A2Q14240 407 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 ARHGAP29Q52LW3 1261 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 TMTC2Q8N394 836 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 SUPT20HQ8NEM7 779 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 SH2D4AQ9H788 454 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 UFL1O94874 794 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 MTIF2P46199 727 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 ABCC1P33527 1531 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 H0YHG0 523 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 STX6O43752 255 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 NBPF7P0C2Y1 421 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 CALM1P0DP23 149 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 CALM2P0DP24 149 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 CALM3P0DP25 149 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 ZNF354CQ86Y25 554 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 LARGE2Q8N3Y3 721 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 FERMT1Q9BQL6 677 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 HMG20BQ9P0W2 317 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 LIMCH1Q9UPQ0 1083 aa7.97□□□□□ -1.13
GAPVD1-202ENST00000297933 PHACTR2O75167 634 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 SCAND2PQ9GZW5 306 aaPredicted RBP7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 IL16Q14005 1332 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 MACROD2A1Z1Q3 448 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 SPDYE3A6NKU9 549 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 PRKCSHP14314 528 aaPredicted RBP7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 NAPAP54920 295 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 TAF12Q16514 161 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 EAPPQ56P03 285 aaPredicted RBP7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 TDRD12Q587J7 1177 aaKnown RBP7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 SLC9C2Q5TAH2 1124 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 USP37Q86T82 979 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 ANO10Q9NW15 660 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 MCM9Q9NXL9 1143 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 ORC3Q9UBD5 711 aaPredicted RBP7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 NOD1Q9Y239 953 aa7.96□□□□□ -1.13
GAPVD1-202ENST00000297933 PLEKHH1Q9ULM0 1364 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 MMRN2Q9H8L6 949 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 C6orf50Q9HD87 102 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 DISP3Q9P2K9 1392 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 ERLIN1O75477 346 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 GNAT2P19087 354 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 FAM114A1Q8IWE2 563 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 HOMER2Q9NSB8 354 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 MAP3K5Q99683 1374 aa7.96□□□□□ -1.14
GAPVD1-202ENST00000297933 TRIM27P14373 513 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 LRSAM1Q6UWE0 723 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 RRP36Q96EU6 259 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 SYNCQ9H7C4 482 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 TBX22Q9Y458 520 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 MTHFSDQ2M296 383 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 FILIP1Q7Z7B0 1213 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 RHPN1Q8TCX5 695 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 IP6K1Q92551 441 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 JAG2Q9Y219 1238 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 TNNT1P13805 278 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 HOXC9P31274 260 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 PDE6BP35913 854 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 RTN1Q16799 776 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 TSPYL1Q9H0U9 437 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 NPATQ14207 1427 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 RNMTO43148 476 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 ZBTB43O43298 467 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 CCDC91Q7Z6B0 441 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 HOOK3Q86VS8 718 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 NUP88Q99567 741 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 EXOC1Q9NV70 894 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 FAM193AP78312 1265 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 PARP10Q53GL7 1025 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 DPP8Q6V1X1 898 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 MAGEB6Q8N7X4 407 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 TCHPQ9BT92 498 aa7.95□□□□□ -1.14
GAPVD1-202ENST00000297933 CCDC184Q52MB2 194 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 TTC6Q86TZ1 520 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 LRRC45Q96CN5 670 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 PSMD1Q99460 953 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 CIZ1Q9ULV3 898 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 IVNS1ABPQ9Y6Y0 642 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 KLF18A0A0U1RQI7 1052 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 NIM1KQ8IY84 436 aa7.94□□□□□ -1.14
GAPVD1-202ENST00000297933 GPHNQ9NQX3 736 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms