RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
TMC1-201ENST00000297784 CWC25Q9NXE8 425 aaPredicted RBP8.11□□□□□ -1.11
TMC1-201ENST00000297784 NLRP10Q86W26 655 aa8.11□□□□□ -1.11
TMC1-201ENST00000297784 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
TMC1-201ENST00000297784 OTUD7AQ8TE49 926 aaPredicted RBP8.11□□□□□ -1.11
TMC1-201ENST00000297784 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
TMC1-201ENST00000297784 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
TMC1-201ENST00000297784 RFX5P48382 616 aaPredicted RBP8.1□□□□□ -1.11
TMC1-201ENST00000297784 RAB3GAP1Q15042 981 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 KLHDC4Q8TBB5 520 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 FAM89AQ96GI7 184 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 ZNF500O60304 480 aaPredicted RBP8.1□□□□□ -1.11
TMC1-201ENST00000297784 GPTP24298 496 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 UTP14CQ5TAP6 766 aaKnown RBP8.1□□□□□ -1.11
TMC1-201ENST00000297784 CLEC17AQ6ZS10 378 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 PA2G4Q9UQ80 394 aaKnown RBP8.1□□□□□ -1.11
TMC1-201ENST00000297784 RPS6KA4O75676 772 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 SALL3Q9BXA9 1300 aa8.1□□□□□ -1.11
TMC1-201ENST00000297784 APBB1O00213 710 aa8.09□□□□□ -1.11
TMC1-201ENST00000297784 HMMRO75330 724 aa8.09□□□□□ -1.11
TMC1-201ENST00000297784 ZBTB38Q8NAP3 1195 aaPredicted RBP8.09□□□□□ -1.11
TMC1-201ENST00000297784 TNPO1Q92973 898 aaKnown RBP8.09□□□□□ -1.11
TMC1-201ENST00000297784 COL4A1P02462 1669 aa8.09□□□□□ -1.11
TMC1-201ENST00000297784 MSNP26038 577 aaKnown RBP8.09□□□□□ -1.11
TMC1-201ENST00000297784 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.11
TMC1-201ENST00000297784 SUSD4Q5VX71 490 aa8.09□□□□□ -1.11
TMC1-201ENST00000297784 PLEKHM2Q8IWE5 1019 aa8.09□□□□□ -1.11
TMC1-201ENST00000297784 ARHGEF1Q92888 912 aaKnown RBP8.09□□□□□ -1.11
TMC1-201ENST00000297784 RGPD3A6NKT7 1758 aaPredicted RBP8.09□□□□□ -1.11
TMC1-201ENST00000297784 RGPD4Q7Z3J3 1758 aa8.09□□□□□ -1.11
TMC1-201ENST00000297784 COL24A1Q17RW2 1714 aa8.09□□□□□ -1.12
TMC1-201ENST00000297784 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 PLSCR1O15162 318 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 GNPATO15228 680 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 PCCAP05165 728 aaPredicted RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 PTPN12Q05209 780 aaKnown RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 LAMB2P55268 1798 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 SASH1O94885 1247 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 NASPP49321 788 aaPredicted RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 TXNRD1Q16881 649 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 TAF1P21675 1872 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 SURF6O75683 361 aaKnown RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 LMBR1LQ6UX01 489 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 ANP32BQ92688 251 aaKnown RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 PLA2G12BQ9BX93 195 aa8.08□□□□□ -1.12
TMC1-201ENST00000297784 NOL7Q9UMY1 257 aaKnown RBP8.08□□□□□ -1.12
TMC1-201ENST00000297784 CSF1RP07333 972 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 MCM5P33992 734 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 USPL1Q5W0Q7 1092 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 CLEC4GQ6UXB4 293 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 NARFQ9UHQ1 456 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 APBA3O96018 575 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
TMC1-201ENST00000297784 HSP90AB3PQ58FF7 597 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 TBC1D9BQ66K14 1250 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 LRRCC1Q9C099 1032 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 CDHR2Q9BYE9 1310 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 NTSR2O95665 410 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 ZNF445P59923 1031 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 CSPP1Q1MSJ5 1256 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 RHPN1Q8TCX5 695 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 PDLIM2Q96JY6 352 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 IL1RAPL2Q9NP60 686 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
TMC1-201ENST00000297784 RTCBQ9Y3I0 505 aaKnown RBP8.07□□□□□ -1.12
TMC1-201ENST00000297784 FGD1P98174 961 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 KLHL40Q2TBA0 621 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 TTLL11Q8NHH1 800 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 TRMT112Q9UI30 125 aaKnown RBP8.06□□□□□ -1.12
TMC1-201ENST00000297784 NIP7Q9Y221 180 aaKnown RBP eCLIP8.06□□□□□ -1.12
TMC1-201ENST00000297784 USP42Q9H9J4 1324 aaKnown RBP8.06□□□□□ -1.12
TMC1-201ENST00000297784 PHF14O94880 888 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 ZNF827Q17R98 1081 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 TSHZ3Q63HK5 1081 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 ATG9AQ7Z3C6 839 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 AKT1S1Q96B36 256 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 ZNF594Q96JF6 807 aaPredicted RBP8.06□□□□□ -1.12
TMC1-201ENST00000297784 SIL1Q9H173 461 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 HDAC5Q9UQL6 1122 aa8.06□□□□□ -1.12
TMC1-201ENST00000297784 RAB11FIP3O75154 756 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 DMTNQ08495 405 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 ILDR1Q86SU0 546 aaPredicted RBP8.05□□□□□ -1.12
TMC1-201ENST00000297784 NUTM1Q86Y26 1132 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
TMC1-201ENST00000297784 IRS4O14654 1257 aaPredicted RBP8.05□□□□□ -1.12
TMC1-201ENST00000297784 RGL2O15211 777 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 MFAP1P55081 439 aaKnown RBP8.05□□□□□ -1.12
TMC1-201ENST00000297784 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 SPEF2Q9C093 1822 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 UQCRHLA0A096LP55 91 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 FAM177BA6PVY3 158 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 UQCRHP07919 91 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 PDE1AP54750 535 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 C3orf67Q6ZVT6 689 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 CCDC85AQ96PX6 553 aaPredicted RBP8.05□□□□□ -1.12
TMC1-201ENST00000297784 GREM2Q9H772 168 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms