RNA–Protein interactions for RNA: ENST00000297157.7

RP9-201, Transcript of RP9, pre-mRNA splicing factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RP9, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-201ENST00000297157 TMX4Q9H1E5 349 aaPredicted RBP33.04■■■□□ 2.88
RP9-201ENST00000297157 BBOX1O75936 387 aa33.03■■■□□ 2.88
RP9-201ENST00000297157 HCLS1P14317 486 aaPredicted RBP33.03■■■□□ 2.88
RP9-201ENST00000297157 C8orf58Q8NAV2 365 aa33.03■■■□□ 2.88
RP9-201ENST00000297157 SH3TC1Q8TE82 1336 aa33.02■■■□□ 2.88
RP9-201ENST00000297157 FOXN1O15353 648 aa33.02■■■□□ 2.88
RP9-201ENST00000297157 SP8Q8IXZ3 490 aa33.02■■■□□ 2.88
RP9-201ENST00000297157 SUPT20HQ8NEM7 779 aa33.02■■■□□ 2.88
RP9-201ENST00000297157 CHPF2Q9P2E5 772 aa33.02■■■□□ 2.88
RP9-201ENST00000297157 LRRC37AA6NMS7 1700 aa33.02■■■□□ 2.88
RP9-201ENST00000297157 USP50Q70EL3 339 aaPredicted RBP33.01■■■□□ 2.87
RP9-201ENST00000297157 DBF4Q9UBU7 674 aaPredicted RBP33.01■■■□□ 2.87
RP9-201ENST00000297157 TRMT112Q9UI30 125 aaKnown RBP33.01■■■□□ 2.87
RP9-201ENST00000297157 DDX60Q8IY21 1712 aaKnown RBP33.01■■■□□ 2.87
RP9-201ENST00000297157 DUOX1Q9NRD9 1551 aa33■■■□□ 2.87
RP9-201ENST00000297157 ZNF521Q96K83 1311 aa33■■■□□ 2.87
RP9-201ENST00000297157 CAPN15O75808 1086 aa32.99■■■□□ 2.87
RP9-201ENST00000297157 GRAPQ13588 217 aa32.99■■■□□ 2.87
RP9-201ENST00000297157 GRAPLQ8TC17 118 aaPredicted RBP32.99■■■□□ 2.87
RP9-201ENST00000297157 ZNRF3Q9ULT6 936 aa32.99■■■□□ 2.87
RP9-201ENST00000297157 DPP8Q6V1X1 898 aaPredicted RBP32.98■■■□□ 2.87
RP9-201ENST00000297157 DDX46Q7L014 1031 aaKnown RBP32.98■■■□□ 2.87
RP9-201ENST00000297157 TSR2Q969E8 191 aaKnown RBP32.98■■■□□ 2.87
RP9-201ENST00000297157 GPRC5DQ9NZD1 345 aa32.98■■■□□ 2.87
RP9-201ENST00000297157 THSD7BQ9C0I4 1608 aa32.98■■■□□ 2.87
RP9-201ENST00000297157 CXCL9Q07325 125 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 KIAA2012Q0VF49 1180 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 DEFB115Q30KQ5 88 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 MPNDQ8N594 471 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 TSPYL6Q8N831 410 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 PLBD2Q8NHP8 589 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 PRDM10Q9NQV6 1147 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 WBP1LQ9NX94 342 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 TAF1P21675 1872 aa32.97■■■□□ 2.87
RP9-201ENST00000297157 TRPM7Q96QT4 1865 aa32.96■■■□□ 2.87
RP9-201ENST00000297157 ISCA1Q9BUE6 129 aa32.95■■■□□ 2.87
RP9-201ENST00000297157 ADARB2Q9NS39 739 aaKnown RBP32.95■■■□□ 2.87
RP9-201ENST00000297157 HYPKQ9NX55 129 aa32.95■■■□□ 2.87
RP9-201ENST00000297157 TMC4Q7Z404 712 aa32.94■■■□□ 2.86
RP9-201ENST00000297157 CDHR2Q9BYE9 1310 aa32.94■■■□□ 2.86
RP9-201ENST00000297157 ELL2O00472 640 aaPredicted RBP32.93■■■□□ 2.86
RP9-201ENST00000297157 CTCFP49711 727 aaPredicted RBP32.93■■■□□ 2.86
RP9-201ENST00000297157 FMR1Q06787 632 aaKnown RBP eCLIP32.93■■■□□ 2.86
RP9-201ENST00000297157 ANKRD13DQ6ZTN6 518 aa32.93■■■□□ 2.86
RP9-201ENST00000297157 AIDAQ96BJ3 306 aa32.93■■■□□ 2.86
RP9-201ENST00000297157 SPINK5Q9NQ38 1064 aaPredicted RBP32.93■■■□□ 2.86
RP9-201ENST00000297157 ABT1Q9ULW3 272 aaKnown RBP32.93■■■□□ 2.86
RP9-201ENST00000297157 FANCIQ9NVI1 1328 aa32.93■■■□□ 2.86
RP9-201ENST00000297157 CHMP4AQ9BY43 222 aa32.92■■■□□ 2.86
RP9-201ENST00000297157 WDR33Q9C0J8 1336 aaKnown RBP32.92■■■□□ 2.86
RP9-201ENST00000297157 SALL2Q9Y467 1007 aaPredicted RBP32.91■■■□□ 2.86
RP9-201ENST00000297157 GMPSP49915 693 aaPredicted RBP32.9■■■□□ 2.86
RP9-201ENST00000297157 COL4A1P02462 1669 aa32.89■■■□□ 2.86
RP9-201ENST00000297157 SF3B3Q15393 1217 aaKnown RBP32.89■■■□□ 2.86
RP9-201ENST00000297157 CIAPIN1Q6FI81 312 aa32.89■■■□□ 2.86
RP9-201ENST00000297157 TRAF5O00463 557 aa32.88■■■□□ 2.85
RP9-201ENST00000297157 TRIM28Q13263 835 aaKnown RBP32.88■■■□□ 2.85
RP9-201ENST00000297157 CST9Q5W186 159 aa32.88■■■□□ 2.85
RP9-201ENST00000297157 CCDC30Q5VVM6 783 aa32.87■■■□□ 2.85
RP9-201ENST00000297157 ZNF428Q96B54 188 aa32.87■■■□□ 2.85
RP9-201ENST00000297157 FAM89AQ96GI7 184 aa32.87■■■□□ 2.85
RP9-201ENST00000297157 PGAP2Q9UHJ9 254 aa32.87■■■□□ 2.85
RP9-201ENST00000297157 YDJCA8MPS7 323 aa32.86■■■□□ 2.85
RP9-201ENST00000297157 ATP5J2-PTCD1G3V325 749 aa32.86■■■□□ 2.85
RP9-201ENST00000297157 TNIP1Q15025 636 aa32.86■■■□□ 2.85
RP9-201ENST00000297157 TWISTNBQ3B726 338 aaPredicted RBP32.86■■■□□ 2.85
RP9-201ENST00000297157 DIEXFQ68CQ4 756 aaKnown RBP32.86■■■□□ 2.85
RP9-201ENST00000297157 RAD17O75943 681 aa32.85■■■□□ 2.85
RP9-201ENST00000297157 MAP2K1Q02750 393 aaPredicted RBP32.85■■■□□ 2.85
RP9-201ENST00000297157 CELF1Q92879 486 aaKnown RBP32.85■■■□□ 2.85
RP9-201ENST00000297157 PHAXQ9H814 394 aaKnown RBP32.84■■■□□ 2.85
RP9-201ENST00000297157 TLL2Q9Y6L7 1015 aa32.84■■■□□ 2.85
RP9-201ENST00000297157 CAPNS2Q96L46 248 aa32.83■■■□□ 2.85
RP9-201ENST00000297157 VAMP4O75379 141 aa32.82■■■□□ 2.84
RP9-201ENST00000297157 HSPA8P11142 646 aaKnown RBP32.82■■■□□ 2.84
RP9-201ENST00000297157 LBX1P52954 281 aa32.82■■■□□ 2.84
RP9-201ENST00000297157 ZC3H15Q8WU90 426 aaKnown RBP32.82■■■□□ 2.84
RP9-201ENST00000297157 ECE1P42892 770 aa32.81■■■□□ 2.84
RP9-201ENST00000297157 HIRAP54198 1017 aaPredicted RBP32.81■■■□□ 2.84
RP9-201ENST00000297157 GOLGA2Q08379 1002 aa32.81■■■□□ 2.84
RP9-201ENST00000297157 BCL2L13Q9BXK5 485 aa32.81■■■□□ 2.84
RP9-201ENST00000297157 TRPM4Q8TD43 1214 aa32.8■■■□□ 2.84
RP9-201ENST00000297157 MYH16Q9H6N6 1097 aa32.8■■■□□ 2.84
RP9-201ENST00000297157 IRS4O14654 1257 aaPredicted RBP32.79■■■□□ 2.84
RP9-201ENST00000297157 CYP4F22Q6NT55 531 aa32.79■■■□□ 2.84
RP9-201ENST00000297157 EXOSC9Q06265 439 aaKnown RBP32.78■■■□□ 2.84
RP9-201ENST00000297157 WASHC4Q2M389 1173 aa32.78■■■□□ 2.84
RP9-201ENST00000297157 MIER1Q8N108 512 aa32.78■■■□□ 2.84
RP9-201ENST00000297157 GLIS2Q9BZE0 524 aaPredicted RBP32.78■■■□□ 2.84
RP9-201ENST00000297157 CNOT7Q9UIV1 285 aaKnown RBP32.78■■■□□ 2.84
RP9-201ENST00000297157 NSFL1CQ9UNZ2 370 aaKnown RBP32.78■■■□□ 2.84
RP9-201ENST00000297157 SAPCD2Q86UD0 394 aa32.77■■■□□ 2.84
RP9-201ENST00000297157 POLLQ9UGP5 575 aa32.77■■■□□ 2.84
RP9-201ENST00000297157 SHTN1A0MZ66 631 aa32.76■■■□□ 2.83
RP9-201ENST00000297157 GPSM2P81274 684 aa32.76■■■□□ 2.83
RP9-201ENST00000297157 RTL5Q5HYW3 569 aaPredicted RBP32.76■■■□□ 2.83
RP9-201ENST00000297157 ZBTB38Q8NAP3 1195 aaPredicted RBP32.76■■■□□ 2.83
RP9-201ENST00000297157 DPF2Q92785 391 aa32.76■■■□□ 2.83
RP9-201ENST00000297157 GPR101Q96P66 508 aaPredicted RBP32.76■■■□□ 2.83
RP9-201ENST00000297157 CACNA1FO60840 1977 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms