RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
TGFA-201ENST00000295400 SEC62Q99442 399 aaKnown RBP13.53□□□□□ -0.24
TGFA-201ENST00000295400 RAD50Q92878 1312 aa13.52□□□□□ -0.24
TGFA-201ENST00000295400 URI1O94763 535 aaPredicted RBP13.52□□□□□ -0.24
TGFA-201ENST00000295400 STARD3NLO95772 234 aa13.52□□□□□ -0.24
TGFA-201ENST00000295400 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.24
TGFA-201ENST00000295400 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.24
TGFA-201ENST00000295400 UVSSAQ2YD98 709 aa13.52□□□□□ -0.25
TGFA-201ENST00000295400 AMOTL1Q8IY63 956 aa13.52□□□□□ -0.25
TGFA-201ENST00000295400 MCM5P33992 734 aa13.52□□□□□ -0.25
TGFA-201ENST00000295400 ME3Q16798 604 aa13.52□□□□□ -0.25
TGFA-201ENST00000295400 AOPEPQ8N6M6 819 aa13.52□□□□□ -0.25
TGFA-201ENST00000295400 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
TGFA-201ENST00000295400 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.25
TGFA-201ENST00000295400 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
TGFA-201ENST00000295400 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
TGFA-201ENST00000295400 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
TGFA-201ENST00000295400 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
TGFA-201ENST00000295400 ZSCAN25Q6NSZ9 544 aa13.51□□□□□ -0.25
TGFA-201ENST00000295400 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
TGFA-201ENST00000295400 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
TGFA-201ENST00000295400 DHX8Q14562 1220 aaKnown RBP13.51□□□□□ -0.25
TGFA-201ENST00000295400 ZSWIM4Q9H7M6 989 aa13.51□□□□□ -0.25
TGFA-201ENST00000295400 PAG1Q9NWQ8 432 aa13.51□□□□□ -0.25
TGFA-201ENST00000295400 GOLGA8AA7E2F4 631 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 RANBP6O60518 1105 aaKnown RBP13.5□□□□□ -0.25
TGFA-201ENST00000295400 LMOD1P29536 600 aaPredicted RBP13.5□□□□□ -0.25
TGFA-201ENST00000295400 ZNF790Q6PG37 636 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 CHD1O14646 1710 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 PTPDC1A2A3K4 754 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 CDKL5O76039 1030 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 SKILP12757 684 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 ZNF496Q96IT1 587 aaPredicted RBP13.5□□□□□ -0.25
TGFA-201ENST00000295400 SLC26A6Q9BXS9 759 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 CNNM3Q8NE01 707 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 A0A0D9SFI3 127 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 A1BGP04217 495 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 STX1AQ16623 288 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 FAM89AQ96GI7 184 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 TMX4Q9H1E5 349 aaPredicted RBP13.5□□□□□ -0.25
TGFA-201ENST00000295400 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
TGFA-201ENST00000295400 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 TMEM67Q5HYA8 995 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 TBX22Q9Y458 520 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 UBXN4Q92575 508 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 ERBB4Q15303 1308 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 SLC9C2Q5TAH2 1124 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 TRERF1Q96PN7 1200 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 TLR7Q9NYK1 1049 aaKnown RBP13.49□□□□□ -0.25
TGFA-201ENST00000295400 MYOM2P54296 1465 aa13.49□□□□□ -0.25
TGFA-201ENST00000295400 IARSP41252 1262 aaKnown RBP13.48□□□□□ -0.25
TGFA-201ENST00000295400 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
TGFA-201ENST00000295400 GPS2Q13227 327 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 ADCY10Q96PN6 1610 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 A0A087WWV3 80 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 SMTNL1A8MU46 457 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 LIG1P18858 919 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 KIF2CQ99661 725 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 PRC1O43663 620 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
TGFA-201ENST00000295400 UBE2Q2Q8WVN8 375 aa13.48□□□□□ -0.25
TGFA-201ENST00000295400 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
TGFA-201ENST00000295400 RPS6KB1P23443 525 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
TGFA-201ENST00000295400 IGHMBP2P38935 993 aaKnown RBP13.47□□□□□ -0.25
TGFA-201ENST00000295400 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
TGFA-201ENST00000295400 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 CEP135Q66GS9 1140 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 ALG1Q9BT22 464 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
TGFA-201ENST00000295400 POLR3GO15318 223 aaPredicted RBP13.46□□□□□ -0.25
TGFA-201ENST00000295400 GNL3LQ9NVN8 582 aaKnown RBP13.46□□□□□ -0.25
TGFA-201ENST00000295400 LARGE1O95461 756 aa13.46□□□□□ -0.25
TGFA-201ENST00000295400 DHX32Q7L7V1 743 aaKnown RBP13.46□□□□□ -0.25
TGFA-201ENST00000295400 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.25
TGFA-201ENST00000295400 CTAGE5O15320 804 aa13.46□□□□□ -0.26
TGFA-201ENST00000295400 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.26
TGFA-201ENST00000295400 MAP3K12Q12852 859 aa13.46□□□□□ -0.26
TGFA-201ENST00000295400 ZKSCAN3Q9BRR0 538 aa13.46□□□□□ -0.26
TGFA-201ENST00000295400 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.26
TGFA-201ENST00000295400 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.26
TGFA-201ENST00000295400 GCKRQ14397 625 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms