RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 FERMT3Q86UX7 667 aa18.9■□□□□ 0.62
NCKIPSD-201ENST00000294129 ZNF335Q9H4Z2 1342 aaPredicted RBP18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 CLCN1P35523 988 aa18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 ST3GAL1Q11201 340 aa18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 CWC25Q9NXE8 425 aaPredicted RBP18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 F13A1P00488 732 aa18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 IL2RBP14784 551 aa18.89■□□□□ 0.61
NCKIPSD-201ENST00000294129 GOLIM4O00461 696 aa18.88■□□□□ 0.61
NCKIPSD-201ENST00000294129 ATP5JP18859 108 aa18.88■□□□□ 0.61
NCKIPSD-201ENST00000294129 DNM1Q05193 864 aaKnown RBP18.88■□□□□ 0.61
NCKIPSD-201ENST00000294129 RABL6Q3YEC7 729 aaPredicted RBP18.88■□□□□ 0.61
NCKIPSD-201ENST00000294129 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
NCKIPSD-201ENST00000294129 CPDO75976 1380 aa18.88■□□□□ 0.61
NCKIPSD-201ENST00000294129 CASP7P55210 303 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 FAM173BQ6P4H8 233 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 UBE2Q2Q8WVN8 375 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 LRRC2Q9BYS8 371 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 PSMA5P28066 241 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 FOXO4P98177 505 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 TAF5LO75529 589 aa18.87■□□□□ 0.61
NCKIPSD-201ENST00000294129 ARFGEF2Q9Y6D5 1785 aa18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 SYAP1Q96A49 352 aaPredicted RBP18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 SH2B1Q9NRF2 756 aaPredicted RBP18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 ZSCAN31Q96LW9 406 aaPredicted RBP18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 MTMR6Q9Y217 621 aa18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 COL15A1P39059 1388 aa18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 MED23Q9ULK4 1368 aa18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 MRC1P22897 1456 aa18.86■□□□□ 0.61
NCKIPSD-201ENST00000294129 LARP1BQ659C4 914 aaKnown RBP18.85■□□□□ 0.61
NCKIPSD-201ENST00000294129 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
NCKIPSD-201ENST00000294129 LMTK3Q96Q04 1460 aa18.85■□□□□ 0.61
NCKIPSD-201ENST00000294129 A0A0G2JS52 829 aa18.85■□□□□ 0.61
NCKIPSD-201ENST00000294129 PPP1R9BQ96SB3 815 aa18.85■□□□□ 0.61
NCKIPSD-201ENST00000294129 KCNB2Q92953 911 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 TSPY26PQ9H489 355 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 H7C1W4 665 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 HSP90B1P14625 803 aaKnown RBP18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 FGD1P98174 961 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 MPNDQ8N594 471 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 ERVV-2B6SEH9 535 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 TMOD3Q9NYL9 352 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 ASAP1Q9ULH1 1129 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 ZNF609O15014 1411 aa18.84■□□□□ 0.61
NCKIPSD-201ENST00000294129 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.61
NCKIPSD-201ENST00000294129 PPFIA3O75145 1194 aa18.83■□□□□ 0.61
NCKIPSD-201ENST00000294129 ATG9AQ7Z3C6 839 aa18.83■□□□□ 0.61
NCKIPSD-201ENST00000294129 SNRKQ9NRH2 765 aa18.83■□□□□ 0.61
NCKIPSD-201ENST00000294129 FOSBP53539 338 aa18.83■□□□□ 0.6
NCKIPSD-201ENST00000294129 CDC37L1Q7L3B6 337 aa18.83■□□□□ 0.6
NCKIPSD-201ENST00000294129 HAUS7Q99871 368 aa18.83■□□□□ 0.6
NCKIPSD-201ENST00000294129 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.6
NCKIPSD-201ENST00000294129 COL5A2P05997 1499 aaPredicted RBP18.83■□□□□ 0.6
NCKIPSD-201ENST00000294129 TOB2Q14106 344 aaPredicted RBP18.82■□□□□ 0.6
NCKIPSD-201ENST00000294129 FAM89AQ96GI7 184 aa18.82■□□□□ 0.6
NCKIPSD-201ENST00000294129 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
NCKIPSD-201ENST00000294129 ATP6V1DQ9Y5K8 247 aa18.82■□□□□ 0.6
NCKIPSD-201ENST00000294129 GPTP24298 496 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 FKBP4Q02790 459 aaKnown RBP eCLIP18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 MCMDC2Q4G0Z9 681 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 DNAJC10Q8IXB1 793 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 PAG1Q9NWQ8 432 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 MSNP26038 577 aaKnown RBP18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
NCKIPSD-201ENST00000294129 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 A0A1B0GUL7 405 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 CYP21A2P08686 494 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 GORABQ5T7V8 394 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 JAK2O60674 1132 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 TAF7LQ5H9L4 462 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 KBTBD3Q8NAB2 608 aa18.8■□□□□ 0.6
NCKIPSD-201ENST00000294129 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 UBE2HP62256 183 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 HSP90AB3PQ58FF7 597 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 Q6ZUG5 572 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 CCDC191Q8NCU4 936 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 TFIP11Q9UBB9 837 aaKnown RBP18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 EYA2O00167 538 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 PHF14O94880 888 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
NCKIPSD-201ENST00000294129 IL15P40933 162 aaPredicted RBP18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 ANKRD1Q15327 319 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 BTG4Q9NY30 223 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 CCDC183Q5T5S1 534 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 CHST3Q7LGC8 479 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 BRF1Q92994 677 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 GLI3P10071 1580 aa18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 XIRP1Q702N8 1843 aaKnown RBP18.78■□□□□ 0.6
NCKIPSD-201ENST00000294129 HCLS1P14317 486 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms