RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 COPRSQ9NQ92 184 aa18.06■□□□□ 0.48
CCDC116-201ENST00000292779 SNRKQ9NRH2 765 aa18.06■□□□□ 0.48
CCDC116-201ENST00000292779 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
CCDC116-201ENST00000292779 CNPY2Q9Y2B0 182 aa18.06■□□□□ 0.48
CCDC116-201ENST00000292779 DTNBO60941 627 aa18.05■□□□□ 0.48
CCDC116-201ENST00000292779 RFX5P48382 616 aaPredicted RBP18.05■□□□□ 0.48
CCDC116-201ENST00000292779 ZSCAN31Q96LW9 406 aaPredicted RBP18.05■□□□□ 0.48
CCDC116-201ENST00000292779 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
CCDC116-201ENST00000292779 SLC27A2O14975 620 aa18.05■□□□□ 0.48
CCDC116-201ENST00000292779 GJB2P29033 226 aa18.05■□□□□ 0.48
CCDC116-201ENST00000292779 PTPN12Q05209 780 aaKnown RBP18.05■□□□□ 0.48
CCDC116-201ENST00000292779 TMEM87AQ8NBN3 555 aa18.05■□□□□ 0.48
CCDC116-201ENST00000292779 PDLIM2Q96JY6 352 aa18.05■□□□□ 0.48
CCDC116-201ENST00000292779 SH2B1Q9NRF2 756 aaPredicted RBP18.05■□□□□ 0.48
CCDC116-201ENST00000292779 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
CCDC116-201ENST00000292779 F13A1P00488 732 aa18.04■□□□□ 0.48
CCDC116-201ENST00000292779 EDC3Q96F86 508 aaKnown RBP18.04■□□□□ 0.48
CCDC116-201ENST00000292779 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
CCDC116-201ENST00000292779 GLI3P10071 1580 aa18.04■□□□□ 0.48
CCDC116-201ENST00000292779 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
CCDC116-201ENST00000292779 A0A087WZG4 1122 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 ST3GAL1Q11201 340 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 TFCP2Q12800 502 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 ME3Q16798 604 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 RABL6Q3YEC7 729 aaPredicted RBP18.03■□□□□ 0.48
CCDC116-201ENST00000292779 COL9A3Q14050 684 aaPredicted RBP18.03■□□□□ 0.48
CCDC116-201ENST00000292779 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 ZSCAN30Q86W11 494 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 PLBD2Q8NHP8 589 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
CCDC116-201ENST00000292779 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 SPATA31A5Q5VU36 1347 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 SPATA31A7Q8IWB4 1347 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 PCDH11XQ9BZA7 1347 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 PCDH11YQ9BZA8 1340 aa18.03■□□□□ 0.48
CCDC116-201ENST00000292779 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
CCDC116-201ENST00000292779 NBPF14Q5TI25 921 aa18.02■□□□□ 0.48
CCDC116-201ENST00000292779 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
CCDC116-201ENST00000292779 ZNF589Q86UQ0 364 aaPredicted RBP18.02■□□□□ 0.48
CCDC116-201ENST00000292779 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
CCDC116-201ENST00000292779 NECAB1Q8N987 351 aa18.02■□□□□ 0.47
CCDC116-201ENST00000292779 RNF214Q8ND24 703 aa18.02■□□□□ 0.47
CCDC116-201ENST00000292779 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.47
CCDC116-201ENST00000292779 TSPY26PQ9H489 355 aa18.02■□□□□ 0.47
CCDC116-201ENST00000292779 TPCN1Q9ULQ1 816 aa18.02■□□□□ 0.47
CCDC116-201ENST00000292779 ATP5JP18859 108 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 PSMA5P28066 241 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 TAF6LQ9Y6J9 622 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 COL15A1P39059 1388 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 RNF20Q5VTR2 975 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 MTMR6Q9Y217 621 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 CCDC9Q9Y3X0 531 aaKnown RBP18.01■□□□□ 0.47
CCDC116-201ENST00000292779 ATP6V1DQ9Y5K8 247 aa18.01■□□□□ 0.47
CCDC116-201ENST00000292779 ITGB4P16144 1822 aa18■□□□□ 0.47
CCDC116-201ENST00000292779 PHF14O94880 888 aa18■□□□□ 0.47
CCDC116-201ENST00000292779 CASP7P55210 303 aa18■□□□□ 0.47
CCDC116-201ENST00000292779 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
CCDC116-201ENST00000292779 NKX1-1Q15270 411 aaPredicted RBP18■□□□□ 0.47
CCDC116-201ENST00000292779 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
CCDC116-201ENST00000292779 NDUFB9Q9Y6M9 179 aa18■□□□□ 0.47
CCDC116-201ENST00000292779 FIBPO43427 364 aa17.99■□□□□ 0.47
CCDC116-201ENST00000292779 HS1BP3Q53T59 392 aa17.99■□□□□ 0.47
CCDC116-201ENST00000292779 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
CCDC116-201ENST00000292779 TTLL7Q6ZT98 887 aa17.99■□□□□ 0.47
CCDC116-201ENST00000292779 FNBP4Q8N3X1 1017 aaPredicted RBP17.99■□□□□ 0.47
CCDC116-201ENST00000292779 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
CCDC116-201ENST00000292779 ERVV-2B6SEH9 535 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 TAF5LO75529 589 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 UBE2HP62256 183 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 DBNDD2Q9BQY9 259 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 A1BGP04217 495 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
CCDC116-201ENST00000292779 VPS37CA5D8V6 355 aaPredicted RBP17.97■□□□□ 0.47
CCDC116-201ENST00000292779 MSNP26038 577 aaKnown RBP17.97■□□□□ 0.47
CCDC116-201ENST00000292779 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
CCDC116-201ENST00000292779 CCDC183Q5T5S1 534 aa17.97■□□□□ 0.47
CCDC116-201ENST00000292779 EP400Q96L91 3159 aa17.97■□□□□ 0.47
CCDC116-201ENST00000292779 FAM98CQ17RN3 349 aaKnown RBP17.97■□□□□ 0.47
CCDC116-201ENST00000292779 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
CCDC116-201ENST00000292779 HMG20BQ9P0W2 317 aa17.97■□□□□ 0.47
CCDC116-201ENST00000292779 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 FOXO4P98177 505 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 TSGA10IPQ3SY00 556 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 H7C1W4 665 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 CHGBP05060 677 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 TOB2Q14106 344 aaPredicted RBP17.96■□□□□ 0.47
CCDC116-201ENST00000292779 ANKRD1Q15327 319 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 ALDH8A1Q9H2A2 487 aaPredicted RBP17.96■□□□□ 0.47
CCDC116-201ENST00000292779 USP21Q9UK80 565 aa17.96■□□□□ 0.47
CCDC116-201ENST00000292779 ZNF609O15014 1411 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 HAUS7Q99871 368 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 NOL7Q9UMY1 257 aaKnown RBP17.95■□□□□ 0.46
CCDC116-201ENST00000292779 TNS2Q63HR2 1409 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 EXOC5O00471 708 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms