RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 RBSNQ9H1K0 784 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 DACT1Q9NYF0 836 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 CLIP2Q9UDT6 1046 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 SLC12A7Q9Y666 1083 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 DNA2P51530 1060 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 KLHL40Q2TBA0 621 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 ZNF496Q96IT1 587 aaPredicted RBP5.59□□□□□ -1.51
UBR1-201ENST00000290650 USP44Q9H0E7 712 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 DNAJC25Q9H1X3 360 aa5.59□□□□□ -1.51
UBR1-201ENST00000290650 TLR7Q9NYK1 1049 aaKnown RBP5.59□□□□□ -1.51
UBR1-201ENST00000290650 ORC3Q9UBD5 711 aaPredicted RBP5.59□□□□□ -1.51
UBR1-201ENST00000290650 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.59□□□□□ -1.51
UBR1-201ENST00000290650 V9GYY5 206 aaPredicted RBP5.59□□□□□ -1.51
UBR1-201ENST00000290650 GOLGA8AA7E2F4 631 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 TPM2P07951 284 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 PTH1RQ03431 593 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 AKAP2Q9Y2D5 859 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 hCG_1642624A0A1W2PR95 340 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 MYL10Q9BUA6 226 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 CTNNA3Q9UI47 895 aa5.59□□□□□ -1.52
UBR1-201ENST00000290650 GLI2P10070 1586 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 HECW2Q9P2P5 1572 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 POLR1AO95602 1720 aaPredicted RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 FAM170AA1A519 330 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 SPECC1Q5M775 1068 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 ANKRD20A12PQ8NF67 263 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 CTDP1Q9Y5B0 961 aaPredicted RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 SNX14Q9Y5W7 946 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 MAP2P11137 1827 aaKnown RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 PATL2C9JE40 543 aaKnown RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 RRP9O43818 475 aaKnown RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 JAK2O60674 1132 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 CDK5RAP3Q96JB5 506 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 MCMDC2Q4G0Z9 681 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 DZIP1Q86YF9 867 aaKnown RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 MAGEB6Q8N7X4 407 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 SNX21Q969T3 373 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 MKNK2Q9HBH9 465 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 MADDQ8WXG6 1647 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 A0A087WWV3 80 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 SYT1P21579 422 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 EPS15P42566 896 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 LRSAM1Q6UWE0 723 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 LUZP1Q86V48 1076 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 GOLGA6L1Q8N7Z2 621 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 NIP7Q9Y221 180 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBR1-201ENST00000290650 SBNO1A3KN83 1393 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 NPC1L1Q9UHC9 1359 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 F13A1P00488 732 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 EIF4A1P60842 406 aaKnown RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 FAM182BQ5T319 152 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 TTLL7Q6ZT98 887 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 CMTR1Q8N1G2 835 aaKnown RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 CAGE1Q8TC20 777 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 TANGO6Q9C0B7 1094 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 SH2B1Q9NRF2 756 aaPredicted RBP5.58□□□□□ -1.52
UBR1-201ENST00000290650 SLC5A1P13866 664 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 AFMP43652 599 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 METAP2P50579 478 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBR1-201ENST00000290650 MAP3K12Q12852 859 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 ATP2B3Q16720 1220 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 GPIHBP1Q8IV16 184 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 ZSWIM4Q9H7M6 989 aa5.58□□□□□ -1.52
UBR1-201ENST00000290650 RTL1A6NKG5 1358 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 IPO7O95373 1038 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 UBE2HP62256 183 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 CAVIN4Q5BKX8 364 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 CADPS2Q86UW7 1296 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 LINS1Q8NG48 757 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 ERICH4A6NGS2 130 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 ZNF165P49910 485 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 RUFY3Q7L099 469 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 TMC6Q7Z403 805 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 PLIN2Q99541 437 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 KRT18P05783 430 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 SLC3A2P08195 630 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 DZIP3Q86Y13 1208 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 CEP57L1Q8IYX8 460 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 TMEM2Q9UHN6 1383 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 A0A1B0GUL7 405 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 RBM25P49756 843 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 SLC4A4Q9Y6R1 1079 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 ABCC4O15439 1325 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 RNF17Q9BXT8 1623 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 C6orf229H3BNL8 230 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 SLC27A2O14975 620 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 FAM193AP78312 1265 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 SSRP1Q08945 709 aaKnown RBP5.57□□□□□ -1.52
UBR1-201ENST00000290650 IL2RBP14784 551 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 CYP7A1P22680 504 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 CDC37L1Q7L3B6 337 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 CNNM3Q8NE01 707 aa5.57□□□□□ -1.52
UBR1-201ENST00000290650 A0A0D9SFI3 127 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 A0A1B0GVL5 298 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 IRS4O14654 1257 aaPredicted RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 CCDC112Q8NEF3 446 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 CCDC43Q96MW1 224 aaKnown RBP5.56□□□□□ -1.52
UBR1-201ENST00000290650 C19orf44Q9H6X5 657 aa5.56□□□□□ -1.52
UBR1-201ENST00000290650 FBXO3Q9UK99 471 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms