RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 KSR2Q6VAB6 950 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 TPTE2Q6XPS3 522 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 PPP1R42Q7Z4L9 355 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 NLRP10Q86W26 655 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 C2CD5Q86YS7 1000 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 SYNE4Q8N205 404 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
SSX2B-201ENST00000288839 YTHDC1Q96MU7 727 aaKnown RBP8.73□□□□□ -1.01
SSX2B-201ENST00000288839 ISCA1Q9BUE6 129 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 UTP14AQ9BVJ6 771 aaKnown RBP8.73□□□□□ -1.01
SSX2B-201ENST00000288839 TMEM106CQ9BVX2 250 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 NYXQ9GZU5 481 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 TIAM2Q8IVF5 1701 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 ARFGEF2Q9Y6D5 1785 aa8.73□□□□□ -1.01
SSX2B-201ENST00000288839 CHRM1P11229 460 aaPredicted RBP8.72□□□□□ -1.01
SSX2B-201ENST00000288839 RTL5Q5HYW3 569 aaPredicted RBP8.72□□□□□ -1.01
SSX2B-201ENST00000288839 ARHGAP27Q6ZUM4 889 aa8.72□□□□□ -1.01
SSX2B-201ENST00000288839 JARID2Q92833 1246 aaPredicted RBP8.72□□□□□ -1.01
SSX2B-201ENST00000288839 METTL22Q9BUU2 404 aaPredicted RBP8.72□□□□□ -1.01
SSX2B-201ENST00000288839 BRIP1Q9BX63 1249 aa8.72□□□□□ -1.01
SSX2B-201ENST00000288839 SMC4Q9NTJ3 1288 aa8.72□□□□□ -1.01
SSX2B-201ENST00000288839 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
SSX2B-201ENST00000288839 IGKV5-2P06315 115 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 HCLS1P14317 486 aaPredicted RBP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 PDE6BP35913 854 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 RARSP54136 660 aaKnown RBP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 CWF19L2Q2TBE0 894 aaKnown RBP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 DALRD3Q5D0E6 543 aaKnown RBP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 MAMSTRQ6ZN01 415 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 C3orf67Q6ZVT6 689 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 DNAAF4Q8WXU2 420 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 ZNF622Q969S3 477 aaKnown RBP eCLIP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 FAM89AQ96GI7 184 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 TRMT112Q9UI30 125 aaKnown RBP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 IBTKQ9P2D0 1353 aaPredicted RBP8.71□□□□□ -1.02
SSX2B-201ENST00000288839 ANKRD36CQ5JPF3 1778 aa8.71□□□□□ -1.02
SSX2B-201ENST00000288839 SLX4Q8IY92 1834 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 H0YIN7 160 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
SSX2B-201ENST00000288839 C1QTNF8P60827 252 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 TRIM28Q13263 835 aaKnown RBP8.7□□□□□ -1.02
SSX2B-201ENST00000288839 ALDH1L2Q3SY69 923 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
SSX2B-201ENST00000288839 SH3TC1Q8TE82 1336 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 SBF1O95248 1867 aa8.7□□□□□ -1.02
SSX2B-201ENST00000288839 POTEFA5A3E0 1075 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 NEURL1BA8MQ27 555 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 NFKBIEO00221 500 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 BCAR3O75815 825 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 SRGNP10124 158 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 NEXNQ0ZGT2 675 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 OLFM4Q6UX06 510 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
SSX2B-201ENST00000288839 CCDC191Q8NCU4 936 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 GPBP1L1Q9HC44 474 aaPredicted RBP8.69□□□□□ -1.02
SSX2B-201ENST00000288839 NMRK2Q9NPI5 230 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 RNF181Q9P0P0 153 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 NOB1Q9ULX3 412 aaKnown RBP8.69□□□□□ -1.02
SSX2B-201ENST00000288839 PCNTO95613 3336 aa8.69□□□□□ -1.02
SSX2B-201ENST00000288839 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 KLRG2A4D1S0 409 aaPredicted RBP8.68□□□□□ -1.02
SSX2B-201ENST00000288839 IRS4O14654 1257 aaPredicted RBP8.68□□□□□ -1.02
SSX2B-201ENST00000288839 SLC10A5Q5PT55 438 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 BEND3Q5T5X7 828 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
SSX2B-201ENST00000288839 STYK1Q6J9G0 422 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 ZBTB38Q8NAP3 1195 aaPredicted RBP8.68□□□□□ -1.02
SSX2B-201ENST00000288839 LINS1Q8NG48 757 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 RNF25Q96BH1 459 aaPredicted RBP8.68□□□□□ -1.02
SSX2B-201ENST00000288839 MASTLQ96GX5 879 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 COL4A1P02462 1669 aa8.68□□□□□ -1.02
SSX2B-201ENST00000288839 KIF3CO14782 793 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 C21orf2O43822 256 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 PCCAP05165 728 aaPredicted RBP8.67□□□□□ -1.02
SSX2B-201ENST00000288839 PTPRCP08575 1304 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 NPR1P16066 1061 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 GCKRQ14397 625 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 FER1L6Q2WGJ9 1857 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 CCDC88AQ3V6T2 1871 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 CRY2Q49AN0 593 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 RNF123Q5XPI4 1314 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 PRPF40BQ6NWY9 871 aaKnown RBP8.67□□□□□ -1.02
SSX2B-201ENST00000288839 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
SSX2B-201ENST00000288839 FRAT1Q92837 279 aaPredicted RBP8.67□□□□□ -1.02
SSX2B-201ENST00000288839 NLRP3Q96P20 1036 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 PDZRN3Q9UPQ7 1066 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
SSX2B-201ENST00000288839 PSEN1P49768 467 aa8.66□□□□□ -1.02
SSX2B-201ENST00000288839 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
SSX2B-201ENST00000288839 CNKSR1Q969H4 720 aa8.66□□□□□ -1.02
SSX2B-201ENST00000288839 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
SSX2B-201ENST00000288839 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
SSX2B-201ENST00000288839 COL4A5P29400 1685 aa8.65□□□□□ -1.02
SSX2B-201ENST00000288839 KIF16BQ96L93 1317 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms