RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 AMOTQ4VCS5 1084 aa9.56□□□□□ -0.88
CACNA1D-201ENST00000288139 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
CACNA1D-201ENST00000288139 LLPHQ9BRT6 129 aaKnown RBP9.56□□□□□ -0.88
CACNA1D-201ENST00000288139 CCDC178Q5BJE1 867 aa9.56□□□□□ -0.88
CACNA1D-201ENST00000288139 HDGFL1Q5TGJ6 251 aa9.56□□□□□ -0.88
CACNA1D-201ENST00000288139 KIAA1524Q8TCG1 905 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 FAM135BQ49AJ0 1406 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 RBM5P52756 815 aaKnown RBP eCLIP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 KRT83P78385 493 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 SH2D4BQ5SQS7 431 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 C16orf45Q96MC5 204 aaPredicted RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 TTC36A6NLP5 189 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 GAS8O95995 478 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 NBPF7P0C2Y1 421 aaPredicted RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 TMTC2Q8N394 836 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 RSRC1Q96IZ7 334 aaKnown RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 IFT74Q96LB3 600 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 TTC21AQ8NDW8 1320 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 TMEM57Q8N5G2 664 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 EIF4G3O43432 1585 aaKnown RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 ADAMTS12P58397 1594 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 AMPD3Q01432 767 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 SPC24Q8NBT2 197 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 UTP14AQ9BVJ6 771 aaKnown RBP9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 YEATS2Q9ULM3 1422 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 WDR7Q9Y4E6 1490 aa9.55□□□□□ -0.88
CACNA1D-201ENST00000288139 SPATA31E1Q6ZUB1 1445 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 BCAR3O75815 825 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 SKILP12757 684 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 LMAN1P49257 510 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 BRPF1P55201 1214 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 PPFIA1Q13136 1202 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CFAP58Q5T655 872 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 RAB3IPQ96QF0 476 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 HDAC9Q9UKV0 1011 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CTAGE15A4D2H0 777 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 KRT86O43790 486 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CTAGE8P0CG41 777 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CCDC102BQ68D86 513 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CTAGE6Q86UF2 777 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CTAGE4Q8IX94 777 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 JAKMIP2Q96AA8 810 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 STMN1P16949 149 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 GTF2A1P52655 376 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CCDC174Q6PII3 467 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 ECHDC1Q9NTX5 307 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 IBSPP21815 317 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 NT5C2P49902 561 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 C16orf71Q8IYS4 520 aaPredicted RBP9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 POGZQ7Z3K3 1410 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 BRD3Q15059 726 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 SLFNL1Q499Z3 407 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 GBP6Q6ZN66 633 aa9.54□□□□□ -0.88
CACNA1D-201ENST00000288139 CYLC1P35663 651 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 TRAF1Q13077 416 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 UBE4AQ14139 1066 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 RNF187Q5TA31 235 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 LTV1Q96GA3 475 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 HOXB7P09629 217 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 SSFA2P28290 1259 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 TTF1Q15361 905 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 NBPF11Q86T75 865 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 HYPKQ9NX55 129 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 FEZ2Q9UHY8 353 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 TTC31Q49AM3 519 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 JAKMIP1Q96N16 626 aaKnown RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 GBP1P32455 592 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 TPD52P55327 224 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 RAPGEF4Q8WZA2 1011 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 EIF3DO15371 548 aaKnown RBP eCLIP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 PSMC4P43686 418 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 APBA1Q02410 837 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 RASAL2Q9UJF2 1139 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 BUB1BO60566 1050 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 FCHSD1Q86WN1 690 aa9.53□□□□□ -0.88
CACNA1D-201ENST00000288139 SLC4A2P04920 1241 aa9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 SARNPP82979 210 aaKnown RBP9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 ANKRD44Q8N8A2 993 aa9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 CUL5Q93034 780 aa9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 CCDC61Q9Y6R9 512 aa9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.88
CACNA1D-201ENST00000288139 SRGAP3O43295 1099 aa9.52□□□□□ -0.89
CACNA1D-201ENST00000288139 VAV2P52735 878 aa9.52□□□□□ -0.89
CACNA1D-201ENST00000288139 MRPS27Q92552 414 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-201ENST00000288139 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
CACNA1D-201ENST00000288139 CEP83Q9Y592 693 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms