RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 ERBB3P21860 1342 aa11.83□□□□□ -0.51
HMGCR-201ENST00000287936 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
HMGCR-201ENST00000287936 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
HMGCR-201ENST00000287936 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 TOPAZ1Q8N9V7 1692 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
HMGCR-201ENST00000287936 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 CTAGE5O15320 804 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 CAVIN2O95810 425 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
HMGCR-201ENST00000287936 MAP4K1Q92918 833 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 COPRSQ9NQ92 184 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
HMGCR-201ENST00000287936 TMEM87AQ8NBN3 555 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
HMGCR-201ENST00000287936 OVOS2A0A0G2JMS6 1433 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 SDF4Q9BRK5 362 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 STK38Q15208 465 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 SPC24Q8NBT2 197 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 STARD3NLO95772 234 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 TERF1P54274 439 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
HMGCR-201ENST00000287936 CAMK4Q16566 473 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 Q6ZUG5 572 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
HMGCR-201ENST00000287936 FER1L4A9Z1Z3 1794 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 FAM200AQ8TCP9 573 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 BRF1Q92994 677 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 TTC14Q96N46 770 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 PAG1Q9NWQ8 432 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 ME1P48163 572 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 ME3Q16798 604 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
HMGCR-201ENST00000287936 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
HMGCR-201ENST00000287936 CHAMP1Q96JM3 812 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 A0A0D9SFI3 127 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 NFXL1Q6ZNB6 911 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 TOMM22Q9NS69 142 aa11.81□□□□□ -0.52
HMGCR-201ENST00000287936 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
HMGCR-201ENST00000287936 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 MPNDQ8N594 471 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 ZNF500O60304 480 aaPredicted RBP11.8□□□□□ -0.52
HMGCR-201ENST00000287936 IFIT5Q13325 482 aaKnown RBP11.8□□□□□ -0.52
HMGCR-201ENST00000287936 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 SASH1O94885 1247 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
HMGCR-201ENST00000287936 KDM4AO75164 1064 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
HMGCR-201ENST00000287936 KBTBD3Q8NAB2 608 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 CDKL5O76039 1030 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 LLPHQ9BRT6 129 aaKnown RBP11.79□□□□□ -0.52
HMGCR-201ENST00000287936 NALCNQ8IZF0 1738 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 METTL24Q5JXM2 366 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 CEP57L1Q8IYX8 460 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
HMGCR-201ENST00000287936 DHX8Q14562 1220 aaKnown RBP11.79□□□□□ -0.52
HMGCR-201ENST00000287936 CKAP2LQ8IYA6 745 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 JMYQ8N9B5 988 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 HOOK1Q9UJC3 728 aaKnown RBP11.79□□□□□ -0.52
HMGCR-201ENST00000287936 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
HMGCR-201ENST00000287936 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
HMGCR-201ENST00000287936 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
HMGCR-201ENST00000287936 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
HMGCR-201ENST00000287936 EYA2O00167 538 aa11.78□□□□□ -0.52
HMGCR-201ENST00000287936 SAFBQ15424 915 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCR-201ENST00000287936 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
HMGCR-201ENST00000287936 ANO10Q9NW15 660 aa11.78□□□□□ -0.52
HMGCR-201ENST00000287936 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.78□□□□□ -0.525e-7■■■□□ 16.2
HMGCR-201ENST00000287936 DYNC1I1O14576 645 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 TYRO3Q06418 890 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 ATL3Q6DD88 541 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.52
HMGCR-201ENST00000287936 PDLIM2Q96JY6 352 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 PRIMPOLQ96LW4 560 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 HAUS7Q99871 368 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 ERICH2A1L162 156 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 IL2RBP14784 551 aa11.77□□□□□ -0.52
HMGCR-201ENST00000287936 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.52
HMGCR-201ENST00000287936 RIMS1Q86UR5 1692 aaKnown RBP11.77□□□□□ -0.53
HMGCR-201ENST00000287936 TAF5LO75529 589 aa11.77□□□□□ -0.53
HMGCR-201ENST00000287936 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
HMGCR-201ENST00000287936 CCT2P78371 535 aaKnown RBP11.77□□□□□ -0.53
HMGCR-201ENST00000287936 IL17RAQ96F46 866 aa11.77□□□□□ -0.53
HMGCR-201ENST00000287936 RGPD1P0DJD0 1748 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms