RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 STMN2Q93045 179 aa10.36□□□□□ -0.75
SMC2-201ENST00000286398 FERMT1Q9BQL6 677 aa10.36□□□□□ -0.75
SMC2-201ENST00000286398 AKAP2Q9Y2D5 859 aa10.36□□□□□ -0.75
SMC2-201ENST00000286398 BUB1BO60566 1050 aaPredicted RBP10.35□□□□□ -0.75
SMC2-201ENST00000286398 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 MRPS27Q92552 414 aaKnown RBP10.35□□□□□ -0.75
SMC2-201ENST00000286398 KRT13P13646 458 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 MAP2K2P36507 400 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 RRAGBQ5VZM2 374 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 DUSP27Q5VZP5 1158 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 POTEDQ86YR6 584 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 CCDC110Q8TBZ0 833 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 IFT74Q96LB3 600 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 A0A087WZG4 1122 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 TYRO3Q06418 890 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 IFT81Q8WYA0 676 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 THUMPD2Q9BTF0 503 aaKnown RBP10.35□□□□□ -0.75
SMC2-201ENST00000286398 LZTFL1Q9NQ48 299 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 RMND1Q9NWS8 449 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 TTC36A6NLP5 189 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 CACNA2D3Q8IZS8 1091 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 FERMT2Q96AC1 680 aa10.35□□□□□ -0.75
SMC2-201ENST00000286398 RNF41Q9H4P4 317 aaPredicted RBP10.35□□□□□ -0.75
SMC2-201ENST00000286398 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
SMC2-201ENST00000286398 INTS8Q75QN2 995 aaKnown RBP10.34□□□□□ -0.75
SMC2-201ENST00000286398 KCNG4Q8TDN1 519 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 AFAP1L1Q8TED9 768 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
SMC2-201ENST00000286398 GUCA1BQ9UMX6 200 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 GCKP35557 465 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 PRPHP41219 470 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 AP1ARQ63HQ0 302 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 KCNK9Q9NPC2 374 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 GPRASP1Q5JY77 1395 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 ATF3P18847 181 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 ATP11AP98196 1134 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 SF3B2Q13435 895 aaKnown RBP10.34□□□□□ -0.75
SMC2-201ENST00000286398 NEK1Q96PY6 1258 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 PRAM1Q96QH2 718 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMC2-201ENST00000286398 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 MICU3Q86XE3 530 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 NECAB1Q8N987 351 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 CCDC63Q8NA47 563 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 RRAGDQ9NQL2 400 aaPredicted RBP10.34□□□□□ -0.75
SMC2-201ENST00000286398 CABP1Q9NZU7 370 aa10.34□□□□□ -0.75
SMC2-201ENST00000286398 AFMP43652 599 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 EVI5LQ96CN4 794 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 CCDC42Q96M95 316 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 EXOC1Q9NV70 894 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 IGHMBP2P38935 993 aaKnown RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 CEP128Q6ZU80 1094 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 STXBP4Q6ZWJ1 553 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 SEC62Q99442 399 aaKnown RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 ECHDC1Q9NTX5 307 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 ZBTB12Q9Y330 459 aaPredicted RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 NKTRP30414 1462 aaKnown RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 VIMP08670 466 aaKnown RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 MYCBPQ99417 103 aaPredicted RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 CASQ2O14958 399 aaPredicted RBP10.33□□□□□ -0.76
SMC2-201ENST00000286398 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 MAP3K12Q12852 859 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 RPAINQ86UA6 219 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 CERS3Q8IU89 383 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 MORC4Q8TE76 937 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 TRIM27P14373 513 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 CCDC144CPQ8IYA2 1237 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 TBC1D5Q92609 795 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 TRIM7Q9C029 511 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
SMC2-201ENST00000286398 DNM1Q05193 864 aaKnown RBP10.32□□□□□ -0.76
SMC2-201ENST00000286398 NEDD9Q14511 834 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 PSMA7O14818 248 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 LMBR1Q8WVP7 490 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 MTRF1LQ9UGC7 380 aaKnown RBP10.32□□□□□ -0.76
SMC2-201ENST00000286398 TTC21AQ8NDW8 1320 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 ARL1P40616 181 aaPredicted RBP10.32□□□□□ -0.76
SMC2-201ENST00000286398 METAP2P50579 478 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMC2-201ENST00000286398 TMEM67Q5HYA8 995 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 TTC22Q5TAA0 569 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 VCX3BQ9H321 246 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 MIS18AQ9NYP9 233 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 HMG20BQ9P0W2 317 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 F6X3S4 739 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 IGHDP01880 384 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 RAB11FIP4Q86YS3 637 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 ZNF444Q8N0Y2 327 aaPredicted RBP10.32□□□□□ -0.76
SMC2-201ENST00000286398 TTC16Q8NEE8 873 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms