RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 WDR33Q9C0J8 1336 aaKnown RBP12.54□□□□□ -0.4
ERCC3-201ENST00000285398 MCCP23508 829 aa12.54□□□□□ -0.4
ERCC3-201ENST00000285398 SYCP1Q15431 976 aa12.54□□□□□ -0.4
ERCC3-201ENST00000285398 BCL9O00512 1426 aa12.54□□□□□ -0.4
ERCC3-201ENST00000285398 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
ERCC3-201ENST00000285398 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
ERCC3-201ENST00000285398 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
ERCC3-201ENST00000285398 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
ERCC3-201ENST00000285398 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 TMEM51Q9NW97 253 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 ATRNO75882 1429 aa12.53□□□□□ -0.4
ERCC3-201ENST00000285398 IGSF3O75054 1194 aa12.52□□□□□ -0.4
ERCC3-201ENST00000285398 COPS6Q7L5N1 327 aa12.52□□□□□ -0.4
ERCC3-201ENST00000285398 MEIS3Q99687 375 aa12.52□□□□□ -0.4
ERCC3-201ENST00000285398 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.4
ERCC3-201ENST00000285398 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.41
ERCC3-201ENST00000285398 HOXB7P09629 217 aa12.52□□□□□ -0.41
ERCC3-201ENST00000285398 ANAPC15P60006 121 aa12.52□□□□□ -0.41
ERCC3-201ENST00000285398 SMIM5Q71RC9 77 aa12.52□□□□□ -0.41
ERCC3-201ENST00000285398 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
ERCC3-201ENST00000285398 C5P01031 1676 aa12.52□□□□□ -0.41
ERCC3-201ENST00000285398 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
ERCC3-201ENST00000285398 PTPRCP08575 1304 aa12.51□□□□□ -0.41
ERCC3-201ENST00000285398 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
ERCC3-201ENST00000285398 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
ERCC3-201ENST00000285398 IL17RAQ96F46 866 aa12.51□□□□□ -0.41
ERCC3-201ENST00000285398 RGS17Q9UGC6 210 aaPredicted RBP12.51□□□□□ -0.41
ERCC3-201ENST00000285398 MAP3K2Q9Y2U5 619 aa12.51□□□□□ -0.41
ERCC3-201ENST00000285398 DOT1LQ8TEK3 1739 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 TUBGCP6Q96RT7 1819 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 UBE2HP62256 183 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 CWF19L2Q2TBE0 894 aaKnown RBP12.5□□□□□ -0.41
ERCC3-201ENST00000285398 TTLL7Q6ZT98 887 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 ITGB4P16144 1822 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 CCDC66A2RUB6 948 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
ERCC3-201ENST00000285398 PDE1AP54750 535 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
ERCC3-201ENST00000285398 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
ERCC3-201ENST00000285398 PYCARDQ9ULZ3 195 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 ADCY9O60503 1353 aa12.5□□□□□ -0.41
ERCC3-201ENST00000285398 APBB1O00213 710 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
ERCC3-201ENST00000285398 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 KCNF1Q9H3M0 494 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 NCBP1Q09161 790 aaKnown RBP12.49□□□□□ -0.41
ERCC3-201ENST00000285398 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
ERCC3-201ENST00000285398 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 ATP5J2-PTCD1G3V325 749 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 HMMRO75330 724 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 SIK1P57059 783 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 ITPK1Q13572 414 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
ERCC3-201ENST00000285398 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-201ENST00000285398 ZBTB1Q9Y2K1 713 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
ERCC3-201ENST00000285398 THSD7AQ9UPZ6 1657 aa12.48□□□□□ -0.41
ERCC3-201ENST00000285398 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 RPAP1Q9BWH6 1393 aaPredicted RBP12.47□□□□□ -0.41
ERCC3-201ENST00000285398 SMTNL1A8MU46 457 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.47□□□□□ -0.41
ERCC3-201ENST00000285398 ATP6V1DQ9Y5K8 247 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 TRIM37O94972 964 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 PAXBP1Q9Y5B6 917 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
ERCC3-201ENST00000285398 SALL3Q9BXA9 1300 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 NBPF7P0C2Y1 421 aaPredicted RBP12.47□□□□□ -0.41
ERCC3-201ENST00000285398 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
ERCC3-201ENST00000285398 NOL8Q76FK4 1167 aaKnown RBP12.47□□□□□ -0.41
ERCC3-201ENST00000285398 KRT27Q7Z3Y8 459 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 FUCA2Q9BTY2 467 aa12.47□□□□□ -0.41
ERCC3-201ENST00000285398 SLFN14P0C7P3 912 aa12.46□□□□□ -0.41
ERCC3-201ENST00000285398 KSR2Q6VAB6 950 aa12.46□□□□□ -0.41
ERCC3-201ENST00000285398 SPC24Q8NBT2 197 aa12.46□□□□□ -0.41
ERCC3-201ENST00000285398 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.42
ERCC3-201ENST00000285398 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.42
ERCC3-201ENST00000285398 BEND3Q5T5X7 828 aa12.46□□□□□ -0.42
ERCC3-201ENST00000285398 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.42
ERCC3-201ENST00000285398 IPO4Q8TEX9 1081 aaKnown RBP12.46□□□□□ -0.42
ERCC3-201ENST00000285398 MYD88Q99836 296 aa12.46□□□□□ -0.42
ERCC3-201ENST00000285398 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.42
ERCC3-201ENST00000285398 UTRNP46939 3433 aa12.46□□□□□ -0.42
ERCC3-201ENST00000285398 TCHHQ07283 1943 aa12.45□□□□□ -0.42
ERCC3-201ENST00000285398 STARD3NLO95772 234 aa12.45□□□□□ -0.42
ERCC3-201ENST00000285398 USP44Q9H0E7 712 aa12.45□□□□□ -0.42
ERCC3-201ENST00000285398 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
ERCC3-201ENST00000285398 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms