RNA–Protein interactions for RNA: ENST00000283179.14

HNRNPU-201, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HNRNPU, Length 3,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-201ENST00000283179 USP27XA6NNY8 438 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 HTATSF1O43719 755 aaKnown RBP18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 ZNF75DP51815 510 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 ADCY9O60503 1353 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 FILIP1Q7Z7B0 1213 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 ANKRD7Q92527 254 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 LRRC59Q96AG4 307 aaKnown RBP18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 FMN2Q9NZ56 1722 aa18.06■□□□□ 0.48
HNRNPU-201ENST00000283179 TOB2Q14106 344 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 TAOK2Q9UL54 1235 aa18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 NAP1L2Q9ULW6 460 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 SASH1O94885 1247 aa18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 TPM3P06753 285 aa18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 CCDC129Q6ZRS4 1044 aa18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 KRT28Q7Z3Y7 464 aa18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
HNRNPU-201ENST00000283179 H3BQV1 296 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 NBPF6Q5VWK0 638 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 BRF1Q92994 677 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 NBPF4Q96M43 638 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 TM6SF1Q9BZW5 370 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 CTIFO43310 598 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-201ENST00000283179 G3BP1Q13283 466 aaKnown RBP eCLIP18.03■□□□□ 0.482e-8■■■□□ 15.2
HNRNPU-201ENST00000283179 UTP14CQ5TAP6 766 aaKnown RBP18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 CCDC112Q8NEF3 446 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 SUCLG2Q96I99 432 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 SCAND2PQ9GZW5 306 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 ANKARQ7Z5J8 1434 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 PDCP20941 246 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 FGD1P98174 961 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 C11orf57Q6ZUT1 292 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 NPHP3Q7Z494 1330 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 RPS6KB1P23443 525 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 PSMA5P28066 241 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 ZNF771Q7L3S4 317 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
HNRNPU-201ENST00000283179 GUCY1B3Q02153 619 aa18.02■□□□□ 0.48
HNRNPU-201ENST00000283179 CACNA1FO60840 1977 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 GOLGA6L19H0YKK7 550 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 SLFNL1Q499Z3 407 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 PLA2G4DQ86XP0 818 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 ZC3H6P61129 1189 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 RNF20Q5VTR2 975 aa18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 DNAJC2Q99543 621 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-201ENST00000283179 TOPAZ1Q8N9V7 1692 aa18■□□□□ 0.47
HNRNPU-201ENST00000283179 ELP1O95163 1332 aa18■□□□□ 0.47
HNRNPU-201ENST00000283179 USP42Q9H9J4 1324 aaKnown RBP18■□□□□ 0.47
HNRNPU-201ENST00000283179 SMTNL1A8MU46 457 aa18■□□□□ 0.47
HNRNPU-201ENST00000283179 KAZALD1Q96I82 304 aa18■□□□□ 0.47
HNRNPU-201ENST00000283179 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
HNRNPU-201ENST00000283179 CEP135Q66GS9 1140 aa17.99■□□□□ 0.47
HNRNPU-201ENST00000283179 Q6ZUG5 572 aa17.99■□□□□ 0.47
HNRNPU-201ENST00000283179 MYL6BP14649 208 aa17.99■□□□□ 0.47
HNRNPU-201ENST00000283179 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
HNRNPU-201ENST00000283179 BECN2A8MW95 431 aa17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 CCT2P78371 535 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 TDRD7Q8NHU6 1098 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 STRCP1A6NGW2 1772 aa17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 KCNB2Q92953 911 aa17.98■□□□□ 0.47
HNRNPU-201ENST00000283179 SKILP12757 684 aa17.97■□□□□ 0.47
HNRNPU-201ENST00000283179 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
HNRNPU-201ENST00000283179 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
HNRNPU-201ENST00000283179 LRRC8AQ8IWT6 810 aa17.97■□□□□ 0.47
HNRNPU-201ENST00000283179 GRM8O00222 908 aa17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 ANKRD1Q15327 319 aa17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 GOLPH3LQ9H4A5 285 aa17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 KSR2Q6VAB6 950 aa17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 DDX46Q7L014 1031 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 FMNL2Q96PY5 1086 aa17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 CGNQ9P2M7 1197 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-201ENST00000283179 LRRC37A3O60309 1634 aa17.96■□□□□ 0.46
HNRNPU-201ENST00000283179 PIK3C2AO00443 1686 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 STRCQ7RTU9 1775 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 TAF5LO75529 589 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 GCP02774 474 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 GTF3C6Q969F1 213 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 RESTQ13127 1097 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 MTX1Q13505 466 aa17.95■□□□□ 0.46
HNRNPU-201ENST00000283179 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms