RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 IRS4O14654 1257 aaPredicted RBP23.79■■□□□ 1.4
CDC42EP2-201ENST00000279249 DCTPP1Q9H773 170 aa23.79■■□□□ 1.4
CDC42EP2-201ENST00000279249 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
CDC42EP2-201ENST00000279249 LMBR1LQ6UX01 489 aa23.77■■□□□ 1.4
CDC42EP2-201ENST00000279249 TM4SF1P30408 202 aa23.77■■□□□ 1.4
CDC42EP2-201ENST00000279249 ILDR2Q71H61 639 aa23.76■■□□□ 1.39
CDC42EP2-201ENST00000279249 ABCC12Q96J65 1359 aa23.76■■□□□ 1.39
CDC42EP2-201ENST00000279249 NRXN2Q9P2S2 1712 aa23.76■■□□□ 1.39
CDC42EP2-201ENST00000279249 TNRC6CQ9HCJ0 1690 aaKnown RBP23.76■■□□□ 1.39
CDC42EP2-201ENST00000279249 ERFEQ4G0M1 354 aa23.76■■□□□ 1.39
CDC42EP2-201ENST00000279249 GCC1Q96CN9 775 aa23.76■■□□□ 1.39
CDC42EP2-201ENST00000279249 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
CDC42EP2-201ENST00000279249 RFX5P48382 616 aaPredicted RBP23.75■■□□□ 1.39
CDC42EP2-201ENST00000279249 PDE8AO60658 829 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 CSF1RP07333 972 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 DDR1Q08345 913 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 NBPF5PQ86XG9 351 aaPredicted RBP23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 CTSWP56202 376 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 NYXQ9GZU5 481 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 EXOC6BQ9Y2D4 811 aa23.74■■□□□ 1.39
CDC42EP2-201ENST00000279249 PDGFDQ9GZP0 370 aaPredicted RBP23.73■■□□□ 1.39
CDC42EP2-201ENST00000279249 PA2G4Q9UQ80 394 aaKnown RBP23.73■■□□□ 1.39
CDC42EP2-201ENST00000279249 TTLL11Q8NHH1 800 aa23.72■■□□□ 1.39
CDC42EP2-201ENST00000279249 POLRMTO00411 1230 aaKnown RBP23.72■■□□□ 1.39
CDC42EP2-201ENST00000279249 NLGN1Q8N2Q7 840 aa23.72■■□□□ 1.39
CDC42EP2-201ENST00000279249 CHMP3Q9Y3E7 222 aa23.72■■□□□ 1.39
CDC42EP2-201ENST00000279249 SLC10A5Q5PT55 438 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 KLHDC4Q8TBB5 520 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 CCDC85AQ96PX6 553 aaPredicted RBP23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 ANTXR1Q9H6X2 564 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 MSL1Q68DK7 614 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 TPTE2Q6XPS3 522 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 CCDC24Q8N4L8 307 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 SPEF2Q9C093 1822 aa23.71■■□□□ 1.39
CDC42EP2-201ENST00000279249 SURF6O75683 361 aaKnown RBP23.7■■□□□ 1.38
CDC42EP2-201ENST00000279249 NUCB1Q02818 461 aa23.7■■□□□ 1.38
CDC42EP2-201ENST00000279249 PTPN12Q05209 780 aaKnown RBP23.7■■□□□ 1.38
CDC42EP2-201ENST00000279249 C3orf67Q6ZVT6 689 aa23.7■■□□□ 1.38
CDC42EP2-201ENST00000279249 TAF1P21675 1872 aa23.7■■□□□ 1.38
CDC42EP2-201ENST00000279249 ANKRD31Q8N7Z5 1873 aa23.7■■□□□ 1.38
CDC42EP2-201ENST00000279249 SERPINB2P05120 415 aa23.69■■□□□ 1.38
CDC42EP2-201ENST00000279249 GREM2Q9H772 168 aa23.69■■□□□ 1.38
CDC42EP2-201ENST00000279249 COL4A1P02462 1669 aa23.69■■□□□ 1.38
CDC42EP2-201ENST00000279249 GTF2E1P29083 439 aaPredicted RBP23.69■■□□□ 1.38
CDC42EP2-201ENST00000279249 PRR5LQ6MZQ0 368 aa23.69■■□□□ 1.38
CDC42EP2-201ENST00000279249 ANKRD45Q5TZF3 282 aa23.68■■□□□ 1.38
CDC42EP2-201ENST00000279249 CNBD1Q8NA66 436 aa23.68■■□□□ 1.38
CDC42EP2-201ENST00000279249 COPRSQ9NQ92 184 aa23.68■■□□□ 1.38
CDC42EP2-201ENST00000279249 APBB1O00213 710 aa23.67■■□□□ 1.38
CDC42EP2-201ENST00000279249 LRP5O75197 1615 aa23.67■■□□□ 1.38
CDC42EP2-201ENST00000279249 HSP90B1P14625 803 aaKnown RBP23.67■■□□□ 1.38
CDC42EP2-201ENST00000279249 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
CDC42EP2-201ENST00000279249 RIC1Q4ADV7 1423 aa23.67■■□□□ 1.38
CDC42EP2-201ENST00000279249 MMP10P09238 476 aa23.66■■□□□ 1.38
CDC42EP2-201ENST00000279249 CHD1LQ86WJ1 897 aa23.66■■□□□ 1.38
CDC42EP2-201ENST00000279249 ZNF594Q96JF6 807 aaPredicted RBP23.66■■□□□ 1.38
CDC42EP2-201ENST00000279249 SMARCA5O60264 1052 aaPredicted RBP23.66■■□□□ 1.38
CDC42EP2-201ENST00000279249 LNPKQ9C0E8 428 aa23.66■■□□□ 1.38
CDC42EP2-201ENST00000279249 SIL1Q9H173 461 aa23.66■■□□□ 1.38
CDC42EP2-201ENST00000279249 ITGA6P23229 1130 aa23.65■■□□□ 1.38
CDC42EP2-201ENST00000279249 RTL9Q8NET4 1388 aa23.65■■□□□ 1.38
CDC42EP2-201ENST00000279249 SF3B3Q15393 1217 aaKnown RBP23.64■■□□□ 1.38
CDC42EP2-201ENST00000279249 CCDC57Q2TAC2 916 aa23.64■■□□□ 1.38
CDC42EP2-201ENST00000279249 NPHP1O15259 732 aa23.64■■□□□ 1.37
CDC42EP2-201ENST00000279249 RAB11FIP3O75154 756 aa23.64■■□□□ 1.37
CDC42EP2-201ENST00000279249 IFIT5Q13325 482 aaKnown RBP23.64■■□□□ 1.37
CDC42EP2-201ENST00000279249 TBC1D32Q96NH3 1257 aa23.63■■□□□ 1.37
CDC42EP2-201ENST00000279249 FSD2A1L4K1 749 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 CCDC152Q4G0S7 254 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 HSP90AB4PQ58FF6 505 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 RHPN1Q8TCX5 695 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 LRRCC1Q9C099 1032 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 RRAGDQ9NQL2 400 aaPredicted RBP23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 SEC31BQ9NQW1 1179 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 ANKRD18BA2A2Z9 1011 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 SASH1O94885 1247 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 NLRP3Q96P20 1036 aa23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.62■■□□□ 1.37
CDC42EP2-201ENST00000279249 ST5P78524 1137 aa23.61■■□□□ 1.37
CDC42EP2-201ENST00000279249 G3BP1Q13283 466 aaKnown RBP eCLIP23.61■■□□□ 1.37
CDC42EP2-201ENST00000279249 ATG9AQ7Z3C6 839 aa23.61■■□□□ 1.37
CDC42EP2-201ENST00000279249 PUS3Q9BZE2 481 aaKnown RBP23.61■■□□□ 1.37
CDC42EP2-201ENST00000279249 OS9Q13438 667 aaPredicted RBP23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 LRRC24Q50LG9 513 aa23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 KIF1BPQ96EK5 621 aa23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 PARP3Q9Y6F1 533 aa23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 A0A1B0GUL6 1792 aa23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 COL11A2P13942 1736 aaPredicted RBP23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 SLC16A10Q8TF71 515 aa23.6■■□□□ 1.37
CDC42EP2-201ENST00000279249 SEC24BO95487 1268 aa23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 R3HDM1Q15032 1099 aaKnown RBP23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 C16orf71Q8IYS4 520 aaPredicted RBP23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 IL1RAPL2Q9NP60 686 aa23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 EYA2O00167 538 aa23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 GLIPR1L2Q4G1C9 344 aa23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 ERC1Q8IUD2 1116 aa23.59■■□□□ 1.37
CDC42EP2-201ENST00000279249 CIAO1O76071 339 aa23.58■■□□□ 1.37
CDC42EP2-201ENST00000279249 TAF7LQ5H9L4 462 aa23.58■■□□□ 1.37
CDC42EP2-201ENST00000279249 GOLGA6L3A6NEY3 463 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms