RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 WDR33Q9C0J8 1336 aaKnown RBP15.56■□□□□ 0.08
C9orf3-201ENST00000277198 SRGAP3O43295 1099 aa15.56■□□□□ 0.08
C9orf3-201ENST00000277198 ZNF496Q96IT1 587 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-201ENST00000277198 SIPA1L3O60292 1781 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-201ENST00000277198 ZNF831Q5JPB2 1677 aa15.55■□□□□ 0.08
C9orf3-201ENST00000277198 INTS5Q6P9B9 1019 aaKnown RBP15.55■□□□□ 0.08
C9orf3-201ENST00000277198 NAP1L5Q96NT1 182 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-201ENST00000277198 SYT17Q9BSW7 474 aa15.55■□□□□ 0.08
C9orf3-201ENST00000277198 IL1RAPL2Q9NP60 686 aa15.55■□□□□ 0.08
C9orf3-201ENST00000277198 COL24A1Q17RW2 1714 aa15.55■□□□□ 0.08
C9orf3-201ENST00000277198 ALDH1L1O75891 902 aa15.55■□□□□ 0.08
C9orf3-201ENST00000277198 GLRX3O76003 335 aaKnown RBP15.55■□□□□ 0.08
C9orf3-201ENST00000277198 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
C9orf3-201ENST00000277198 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-201ENST00000277198 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
C9orf3-201ENST00000277198 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
C9orf3-201ENST00000277198 RBSNQ9H1K0 784 aa15.54■□□□□ 0.08
C9orf3-201ENST00000277198 TMEM63CQ9P1W3 806 aa15.54■□□□□ 0.08
C9orf3-201ENST00000277198 RTCBQ9Y3I0 505 aaKnown RBP15.54■□□□□ 0.08
C9orf3-201ENST00000277198 PI4KAP2A4QPH2 592 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 CYP19A1P11511 503 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-201ENST00000277198 RC3H1Q5TC82 1133 aaKnown RBP15.53■□□□□ 0.08
C9orf3-201ENST00000277198 NUTM1Q86Y26 1132 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 ERC1Q8IUD2 1116 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 PI4KAP1Q8N8J0 262 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 RUFY2Q8WXA3 655 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 CHPF2Q9P2E5 772 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 KDM3BQ7LBC6 1761 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 RPS6KA4O75676 772 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 NBPF7P0C2Y1 421 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-201ENST00000277198 EIF2S2P20042 333 aaKnown RBP15.53■□□□□ 0.08
C9orf3-201ENST00000277198 MSNP26038 577 aaKnown RBP15.53■□□□□ 0.08
C9orf3-201ENST00000277198 POLD1P28340 1107 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 MCM5P33992 734 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 KIAA1211Q6ZU35 1233 aa15.53■□□□□ 0.08
C9orf3-201ENST00000277198 SRP68Q9UHB9 627 aaKnown RBP15.53■□□□□ 0.08
C9orf3-201ENST00000277198 AK9Q5TCS8 1911 aa15.52■□□□□ 0.08
C9orf3-201ENST00000277198 TTC5Q8N0Z6 440 aa15.52■□□□□ 0.07
C9orf3-201ENST00000277198 TMEM87AQ8NBN3 555 aa15.52■□□□□ 0.07
C9orf3-201ENST00000277198 NLGN2Q8NFZ4 835 aa15.52■□□□□ 0.07
C9orf3-201ENST00000277198 LSG1Q9H089 658 aaKnown RBP15.52■□□□□ 0.07
C9orf3-201ENST00000277198 ZBTB1Q9Y2K1 713 aa15.52■□□□□ 0.07
C9orf3-201ENST00000277198 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-201ENST00000277198 TRAPPC3LQ5T215 181 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 CLASRPQ8N2M8 674 aaKnown RBP15.51■□□□□ 0.07
C9orf3-201ENST00000277198 GPATCH3Q96I76 525 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 TTC14Q96N46 770 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 NOL7Q9UMY1 257 aaKnown RBP15.51■□□□□ 0.07
C9orf3-201ENST00000277198 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-201ENST00000277198 ADCY9O60503 1353 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 PDIA4P13667 645 aaKnown RBP15.51■□□□□ 0.07
C9orf3-201ENST00000277198 TERF1P54274 439 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
C9orf3-201ENST00000277198 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 SNX14Q9Y5W7 946 aa15.51■□□□□ 0.07
C9orf3-201ENST00000277198 C4AP0C0L4 1744 aa15.5■□□□□ 0.07
C9orf3-201ENST00000277198 TPM2P07951 284 aa15.5■□□□□ 0.07
C9orf3-201ENST00000277198 IL25Q9H293 177 aa15.5■□□□□ 0.07
C9orf3-201ENST00000277198 LIMCH1Q9UPQ0 1083 aa15.5■□□□□ 0.07
C9orf3-201ENST00000277198 SYCE3A1L190 88 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 KSR2Q6VAB6 950 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 KCNB2Q92953 911 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 TM6SF1Q9BZW5 370 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
C9orf3-201ENST00000277198 ATP6V1DQ9Y5K8 247 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 GYS1P13807 737 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-201ENST00000277198 FAM184AQ8NB25 1140 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 ECHDC1Q9NTX5 307 aa15.49■□□□□ 0.07
C9orf3-201ENST00000277198 ZNF500O60304 480 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-201ENST00000277198 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-201ENST00000277198 OFD1O75665 1012 aa15.48■□□□□ 0.07
C9orf3-201ENST00000277198 LETM1O95202 739 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-201ENST00000277198 RFC4P35249 363 aa15.48■□□□□ 0.07
C9orf3-201ENST00000277198 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
C9orf3-201ENST00000277198 HIP1O00291 1037 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 UTYO14607 1347 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 MMP10P09238 476 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 HMGB2P26583 209 aaKnown RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 VSIG10Q8N0Z9 540 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 ZSCAN31Q96LW9 406 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 DIAPH3Q9NSV4 1193 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 A1BGP04217 495 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 OS9Q13438 667 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 EVI5LQ96CN4 794 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 TSPY26PQ9H489 355 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 SH2B1Q9NRF2 756 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-201ENST00000277198 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
C9orf3-201ENST00000277198 DDX58O95786 925 aaKnown RBP15.46■□□□□ 0.07
C9orf3-201ENST00000277198 ADRA2BP18089 450 aa15.46■□□□□ 0.07
C9orf3-201ENST00000277198 UVSSAQ2YD98 709 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms