RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CHMP4BQ9H444 224 aaKnown RBP30.92■■■□□ 2.54
SSBP4-201ENST00000270061 LTBP3Q9NS15 1303 aa30.92■■■□□ 2.54
SSBP4-201ENST00000270061 DDX58O95786 925 aaKnown RBP30.92■■■□□ 2.54
SSBP4-201ENST00000270061 CCDC93Q567U6 631 aa30.92■■■□□ 2.54
SSBP4-201ENST00000270061 ZC3H4Q9UPT8 1303 aaKnown RBP30.91■■■□□ 2.54
SSBP4-201ENST00000270061 SLC4A2P04920 1241 aa30.91■■■□□ 2.54
SSBP4-201ENST00000270061 C3orf67Q6ZVT6 689 aa30.91■■■□□ 2.54
SSBP4-201ENST00000270061 RBM17Q96I25 401 aaKnown RBP30.91■■■□□ 2.54
SSBP4-201ENST00000270061 SYNE4Q8N205 404 aa30.9■■■□□ 2.54
SSBP4-201ENST00000270061 HCLS1P14317 486 aaPredicted RBP30.89■■■□□ 2.54
SSBP4-201ENST00000270061 TRIM28Q13263 835 aaKnown RBP30.89■■■□□ 2.54
SSBP4-201ENST00000270061 TSHZ2Q9NRE2 1034 aa30.89■■■□□ 2.54
SSBP4-201ENST00000270061 ZBTB40Q9NUA8 1239 aa30.89■■■□□ 2.54
SSBP4-201ENST00000270061 PCDHB15Q9Y5E8 787 aa30.89■■■□□ 2.54
SSBP4-201ENST00000270061 DDX60Q8IY21 1712 aaKnown RBP30.88■■■□□ 2.53
SSBP4-201ENST00000270061 C1QTNF8P60827 252 aa30.88■■■□□ 2.53
SSBP4-201ENST00000270061 CRAMP1Q96RY5 1269 aa30.88■■■□□ 2.53
SSBP4-201ENST00000270061 OLFM4Q6UX06 510 aa30.87■■■□□ 2.53
SSBP4-201ENST00000270061 IGHDP01880 384 aa30.86■■■□□ 2.53
SSBP4-201ENST00000270061 RTKN2Q8IZC4 609 aa30.86■■■□□ 2.53
SSBP4-201ENST00000270061 FAM89AQ96GI7 184 aa30.86■■■□□ 2.53
SSBP4-201ENST00000270061 MYD88Q99836 296 aa30.86■■■□□ 2.53
SSBP4-201ENST00000270061 INTS3Q68E01 1043 aaKnown RBP30.85■■■□□ 2.53
SSBP4-201ENST00000270061 ZBTB7BO15156 539 aaPredicted RBP30.84■■■□□ 2.53
SSBP4-201ENST00000270061 METTL22Q9BUU2 404 aaPredicted RBP30.84■■■□□ 2.53
SSBP4-201ENST00000270061 MAP3K2Q9Y2U5 619 aa30.84■■■□□ 2.53
SSBP4-201ENST00000270061 FKBP4Q02790 459 aaKnown RBP eCLIP30.83■■■□□ 2.53
SSBP4-201ENST00000270061 KSR2Q6VAB6 950 aa30.83■■■□□ 2.53
SSBP4-201ENST00000270061 PI4KAP2A4QPH2 592 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 KIF3CO14782 793 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 RTL5Q5HYW3 569 aaPredicted RBP30.82■■■□□ 2.52
SSBP4-201ENST00000270061 CC2D2BQ6DHV5 1058 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 PI4KAP1Q8N8J0 262 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 NMRK2Q9NPI5 230 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 TAF1P21675 1872 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 PPEF1O14829 653 aaPredicted RBP30.82■■■□□ 2.52
SSBP4-201ENST00000270061 CCDC191Q8NCU4 936 aa30.82■■■□□ 2.52
SSBP4-201ENST00000270061 RWDD1Q9H446 243 aaPredicted RBP30.82■■■□□ 2.52
SSBP4-201ENST00000270061 G2E3Q7L622 706 aa30.81■■■□□ 2.52
SSBP4-201ENST00000270061 DDX46Q7L014 1031 aaKnown RBP30.79■■■□□ 2.52
SSBP4-201ENST00000270061 ZBTB38Q8NAP3 1195 aaPredicted RBP30.79■■■□□ 2.52
SSBP4-201ENST00000270061 GLTPD2A6NH11 291 aa30.79■■■□□ 2.52
SSBP4-201ENST00000270061 CWC25Q9NXE8 425 aaPredicted RBP30.79■■■□□ 2.52
SSBP4-201ENST00000270061 IRS4O14654 1257 aaPredicted RBP30.78■■■□□ 2.52
SSBP4-201ENST00000270061 FLIIQ13045 1269 aa30.78■■■□□ 2.52
SSBP4-201ENST00000270061 HDAC1Q13547 482 aaPredicted RBP30.78■■■□□ 2.52
SSBP4-201ENST00000270061 GRIPAP1Q4V328 841 aa30.78■■■□□ 2.52
SSBP4-201ENST00000270061 TMX4Q9H1E5 349 aaPredicted RBP30.78■■■□□ 2.52
SSBP4-201ENST00000270061 ZNF277Q9NRM2 450 aaPredicted RBP30.78■■■□□ 2.52
SSBP4-201ENST00000270061 SNED1Q8TER0 1413 aa30.78■■■□□ 2.52
SSBP4-201ENST00000270061 NEXNQ0ZGT2 675 aa30.77■■■□□ 2.52
SSBP4-201ENST00000270061 PSMD1Q99460 953 aa30.77■■■□□ 2.52
SSBP4-201ENST00000270061 BBOX1O75936 387 aa30.76■■■□□ 2.51
SSBP4-201ENST00000270061 DPY19L2Q6NUT2 758 aa30.76■■■□□ 2.51
SSBP4-201ENST00000270061 HSP90B1P14625 803 aaKnown RBP30.75■■■□□ 2.51
SSBP4-201ENST00000270061 FKBP5Q13451 457 aaPredicted RBP30.75■■■□□ 2.51
SSBP4-201ENST00000270061 PCCAP05165 728 aaPredicted RBP30.74■■■□□ 2.51
SSBP4-201ENST00000270061 SF3B3Q15393 1217 aaKnown RBP30.74■■■□□ 2.51
SSBP4-201ENST00000270061 RRAGCQ9HB90 399 aa30.74■■■□□ 2.51
SSBP4-201ENST00000270061 ATP6V0A2Q9Y487 856 aa30.74■■■□□ 2.51
SSBP4-201ENST00000270061 GRAPQ13588 217 aa30.74■■■□□ 2.51
SSBP4-201ENST00000270061 GRAPLQ8TC17 118 aaPredicted RBP30.74■■■□□ 2.51
SSBP4-201ENST00000270061 IGKV5-2P06315 115 aa30.73■■■□□ 2.51
SSBP4-201ENST00000270061 IARSP41252 1262 aaKnown RBP30.73■■■□□ 2.51
SSBP4-201ENST00000270061 CCT4P50991 539 aaKnown RBP30.72■■■□□ 2.51
SSBP4-201ENST00000270061 SLC51AQ86UW1 340 aa30.72■■■□□ 2.51
SSBP4-201ENST00000270061 MYH3P11055 1940 aa30.72■■■□□ 2.51
SSBP4-201ENST00000270061 TOMM70O94826 608 aa30.71■■■□□ 2.51
SSBP4-201ENST00000270061 C16orf71Q8IYS4 520 aaPredicted RBP30.71■■■□□ 2.51
SSBP4-201ENST00000270061 SP8Q8IXZ3 490 aa30.7■■■□□ 2.51
SSBP4-201ENST00000270061 CWF19L2Q2TBE0 894 aaKnown RBP30.69■■■□□ 2.5
SSBP4-201ENST00000270061 JARID2Q92833 1246 aaPredicted RBP30.69■■■□□ 2.5
SSBP4-201ENST00000270061 WDR90Q96KV7 1748 aa30.69■■■□□ 2.5
SSBP4-201ENST00000270061 NEURL1BA8MQ27 555 aa30.69■■■□□ 2.5
SSBP4-201ENST00000270061 DNAAF4Q8WXU2 420 aa30.69■■■□□ 2.5
SSBP4-201ENST00000270061 TMC4Q7Z404 712 aa30.68■■■□□ 2.5
SSBP4-201ENST00000270061 PDE8AO60658 829 aa30.67■■■□□ 2.5
SSBP4-201ENST00000270061 VEGFAP15692 232 aaPredicted RBP30.67■■■□□ 2.5
SSBP4-201ENST00000270061 CEP350Q5VT06 3117 aa30.67■■■□□ 2.5
SSBP4-201ENST00000270061 LRRC37AA6NMS7 1700 aa30.67■■■□□ 2.5
SSBP4-201ENST00000270061 JDP2Q8WYK2 163 aa30.66■■■□□ 2.5
SSBP4-201ENST00000270061 CDHR2Q9BYE9 1310 aa30.66■■■□□ 2.5
SSBP4-201ENST00000270061 F6X3S4 739 aa30.66■■■□□ 2.5
SSBP4-201ENST00000270061 CELF1Q92879 486 aaKnown RBP30.66■■■□□ 2.5
SSBP4-201ENST00000270061 DDNO94850 711 aaPredicted RBP30.64■■■□□ 2.5
SSBP4-201ENST00000270061 CCDC152Q4G0S7 254 aa30.64■■■□□ 2.5
SSBP4-201ENST00000270061 DPP8Q6V1X1 898 aaPredicted RBP30.64■■■□□ 2.5
SSBP4-201ENST00000270061 LARGE2Q8N3Y3 721 aa30.64■■■□□ 2.49
SSBP4-201ENST00000270061 MPNDQ8N594 471 aa30.64■■■□□ 2.49
SSBP4-201ENST00000270061 SMC5Q8IY18 1101 aa30.63■■■□□ 2.49
SSBP4-201ENST00000270061 SUPT20HQ8NEM7 779 aa30.63■■■□□ 2.49
SSBP4-201ENST00000270061 LINS1Q8NG48 757 aa30.63■■■□□ 2.49
SSBP4-201ENST00000270061 COL4A1P02462 1669 aa30.62■■■□□ 2.49
SSBP4-201ENST00000270061 SLC4A10Q6U841 1118 aa30.62■■■□□ 2.49
SSBP4-201ENST00000270061 RBM46Q8TBY0 533 aaKnown RBP30.62■■■□□ 2.49
SSBP4-201ENST00000270061 FZD9O00144 591 aa30.61■■■□□ 2.49
SSBP4-201ENST00000270061 GCKRQ14397 625 aa30.61■■■□□ 2.49
SSBP4-201ENST00000270061 SKAP1Q86WV1 359 aa30.61■■■□□ 2.49
SSBP4-201ENST00000270061 RTFDC1Q9BY42 306 aaPredicted RBP30.61■■■□□ 2.49
SSBP4-201ENST00000270061 COL4A5P29400 1685 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms