RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 ODF2Q5BJF6 829 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-201ENST00000269571 HSPA2P54652 639 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
ERBB2-201ENST00000269571 IFNKQ9P0W0 207 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 NPHP3Q7Z494 1330 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 PPIP5K1Q6PFW1 1433 aa13.95□□□□□ -0.18
ERBB2-201ENST00000269571 NF2P35240 595 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 SRRTQ9BXP5 876 aaKnown RBP13.94□□□□□ -0.18
ERBB2-201ENST00000269571 ABCF2Q9UG63 623 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
ERBB2-201ENST00000269571 GOLIM4O00461 696 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 IMMTQ16891 758 aaKnown RBP13.94□□□□□ -0.18
ERBB2-201ENST00000269571 PALD1Q9ULE6 856 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 ARHGEF12Q9NZN5 1544 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 EPS15P42566 896 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 ATP2B2Q01814 1243 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 CTNNA3Q9UI47 895 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 BRD1O95696 1058 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
ERBB2-201ENST00000269571 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 TXLNAP40222 546 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 SARNPP82979 210 aaKnown RBP13.93□□□□□ -0.18
ERBB2-201ENST00000269571 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
ERBB2-201ENST00000269571 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
ERBB2-201ENST00000269571 ZSCAN20P17040 1043 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-201ENST00000269571 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 TANGO6Q9C0B7 1094 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 CBX8Q9HC52 389 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 CAVIN2O95810 425 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
ERBB2-201ENST00000269571 A0A1W2PP64 1363 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 GOLGA6L10A6NI86 522 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 TRMT2AQ8IZ69 625 aaKnown RBP13.93□□□□□ -0.18
ERBB2-201ENST00000269571 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
ERBB2-201ENST00000269571 IFIT1P09914 478 aaKnown RBP13.92□□□□□ -0.18
ERBB2-201ENST00000269571 MATR3P43243 847 aaKnown RBP eCLIP13.92□□□□□ -0.18
ERBB2-201ENST00000269571 Q6ZUG5 572 aa13.92□□□□□ -0.18
ERBB2-201ENST00000269571 PYCARDQ9ULZ3 195 aa13.92□□□□□ -0.18
ERBB2-201ENST00000269571 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
ERBB2-201ENST00000269571 ZNF521Q96K83 1311 aa13.92□□□□□ -0.18
ERBB2-201ENST00000269571 KDM6BO15054 1643 aa13.92□□□□□ -0.18
ERBB2-201ENST00000269571 CDKL5O76039 1030 aa13.92□□□□□ -0.18
ERBB2-201ENST00000269571 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-201ENST00000269571 IRX5P78411 483 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-201ENST00000269571 CCDC148Q8NFR7 591 aa13.92□□□□□ -0.18
ERBB2-201ENST00000269571 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-201ENST00000269571 UHRF1BP1Q6BDS2 1440 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 MAP2K2P36507 400 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 NMIQ13287 307 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 METTL24Q5JXM2 366 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 RNF187Q5TA31 235 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 TEX2Q8IWB9 1127 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 LRP2BPQ9P2M1 347 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 ENOX2Q16206 610 aaKnown RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 ABCA8O94911 1581 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 GBP6Q6ZN66 633 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 PRM3Q9NNZ6 103 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 A0A087WZG4 1122 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 CDK5RAP3Q96JB5 506 aa13.91□□□□□ -0.18
ERBB2-201ENST00000269571 ZSCAN16Q9H4T2 348 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 GNL3LQ9NVN8 582 aaKnown RBP13.91□□□□□ -0.18
ERBB2-201ENST00000269571 ATP5J2-PTCD1G3V325 749 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 SYKP43405 635 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 VPS18Q9P253 973 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.18
ERBB2-201ENST00000269571 BICDL1Q6ZP65 573 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 ERO1AQ96HE7 468 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 ZHX3Q9H4I2 956 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 LZTFL1Q9NQ48 299 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 YEATS2Q9ULM3 1422 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 MSH6P52701 1360 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 ZSCAN26Q16670 478 aa13.9□□□□□ -0.18
ERBB2-201ENST00000269571 KAT6BQ8WYB5 2073 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 ZNF75DP51815 510 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 CADPS2Q86UW7 1296 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 SNX14Q9Y5W7 946 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 PNMA6EA0A0J9YXQ4 647 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 AMOTQ4VCS5 1084 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 CHPF2Q9P2E5 772 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 ZNF215Q9UL58 517 aaPredicted RBP13.89□□□□□ -0.19
ERBB2-201ENST00000269571 RHOXF2BP0C7M4 288 aa13.89□□□□□ -0.19
ERBB2-201ENST00000269571 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms