RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SCN7AQ01118 1682 aa18.87■□□□□ 0.61
COPS3-201ENST00000268717 EPHA10Q5JZY3 1008 aa18.86■□□□□ 0.61
COPS3-201ENST00000268717 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
COPS3-201ENST00000268717 OS9Q13438 667 aaPredicted RBP18.85■□□□□ 0.61
COPS3-201ENST00000268717 JARID2Q92833 1246 aaPredicted RBP18.85■□□□□ 0.61
COPS3-201ENST00000268717 PLA2G12BQ9BX93 195 aa18.85■□□□□ 0.61
COPS3-201ENST00000268717 ZNF330Q9Y3S2 320 aaPredicted RBP18.85■□□□□ 0.61
COPS3-201ENST00000268717 PARP3Q9Y6F1 533 aa18.85■□□□□ 0.61
COPS3-201ENST00000268717 RGL2O15211 777 aa18.85■□□□□ 0.61
COPS3-201ENST00000268717 RFX5P48382 616 aaPredicted RBP18.85■□□□□ 0.61
COPS3-201ENST00000268717 G3BP1Q13283 466 aaKnown RBP eCLIP18.85■□□□□ 0.61
COPS3-201ENST00000268717 TBC1D9Q6ZT07 1266 aa18.85■□□□□ 0.61
COPS3-201ENST00000268717 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
COPS3-201ENST00000268717 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
COPS3-201ENST00000268717 C10orf71Q711Q0 1435 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 BCORQ6W2J9 1755 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 SDSP20132 328 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 FOXO4P98177 505 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 DDR1Q08345 913 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 CDHR2Q9BYE9 1310 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 KIAA1551Q9HCM1 1747 aa18.84■□□□□ 0.61
COPS3-201ENST00000268717 TM4SF1P30408 202 aa18.83■□□□□ 0.61
COPS3-201ENST00000268717 DZIP3Q86Y13 1208 aaKnown RBP18.83■□□□□ 0.61
COPS3-201ENST00000268717 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.61
COPS3-201ENST00000268717 IL1RAPL2Q9NP60 686 aa18.83■□□□□ 0.61
COPS3-201ENST00000268717 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.61
COPS3-201ENST00000268717 CHD4Q14839 1912 aa18.83■□□□□ 0.6
COPS3-201ENST00000268717 PTPN12Q05209 780 aaKnown RBP18.82■□□□□ 0.6
COPS3-201ENST00000268717 CASC1Q6TDU7 716 aa18.82■□□□□ 0.6
COPS3-201ENST00000268717 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
COPS3-201ENST00000268717 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
COPS3-201ENST00000268717 GPR162Q16538 588 aa18.82■□□□□ 0.6
COPS3-201ENST00000268717 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
COPS3-201ENST00000268717 NRXN2Q9P2S2 1712 aa18.81■□□□□ 0.6
COPS3-201ENST00000268717 NFIXQ14938 502 aa18.81■□□□□ 0.6
COPS3-201ENST00000268717 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
COPS3-201ENST00000268717 NLRP10Q86W26 655 aa18.81■□□□□ 0.6
COPS3-201ENST00000268717 ANKRD36CQ5JPF3 1778 aa18.8■□□□□ 0.6
COPS3-201ENST00000268717 SASH1O94885 1247 aa18.8■□□□□ 0.6
COPS3-201ENST00000268717 MFAP1P55081 439 aaKnown RBP18.8■□□□□ 0.6
COPS3-201ENST00000268717 HLFQ16534 295 aa18.8■□□□□ 0.6
COPS3-201ENST00000268717 GPATCH3Q96I76 525 aa18.8■□□□□ 0.6
COPS3-201ENST00000268717 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
COPS3-201ENST00000268717 FBXO3Q9UK99 471 aa18.8■□□□□ 0.6
COPS3-201ENST00000268717 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
COPS3-201ENST00000268717 RBM25P49756 843 aaKnown RBP18.79■□□□□ 0.6
COPS3-201ENST00000268717 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
COPS3-201ENST00000268717 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
COPS3-201ENST00000268717 NUP98P52948 1817 aa18.79■□□□□ 0.6
COPS3-201ENST00000268717 ERC2O15083 957 aa18.78■□□□□ 0.6
COPS3-201ENST00000268717 BRCA1P38398 1863 aaKnown RBP18.78■□□□□ 0.6
COPS3-201ENST00000268717 GLRX3O76003 335 aaKnown RBP18.78■□□□□ 0.6
COPS3-201ENST00000268717 YBX3P16989 372 aaKnown RBP eCLIP18.78■□□□□ 0.64e-7■■■□□ 18.9
COPS3-201ENST00000268717 TGFB2P61812 414 aa18.78■□□□□ 0.6
COPS3-201ENST00000268717 NUTM1Q86Y26 1132 aa18.78■□□□□ 0.6
COPS3-201ENST00000268717 CIAO1O76071 339 aa18.77■□□□□ 0.6
COPS3-201ENST00000268717 CSF1RP07333 972 aa18.77■□□□□ 0.6
COPS3-201ENST00000268717 IFIT2P09913 472 aaKnown RBP18.77■□□□□ 0.6
COPS3-201ENST00000268717 PARP10Q53GL7 1025 aa18.77■□□□□ 0.6
COPS3-201ENST00000268717 TBC1D9BQ66K14 1250 aa18.77■□□□□ 0.6
COPS3-201ENST00000268717 ECHDC1Q9NTX5 307 aa18.77■□□□□ 0.6
COPS3-201ENST00000268717 CLEC4GQ6UXB4 293 aa18.76■□□□□ 0.59
COPS3-201ENST00000268717 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
COPS3-201ENST00000268717 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
COPS3-201ENST00000268717 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
COPS3-201ENST00000268717 SERPINB2P05120 415 aa18.75■□□□□ 0.59
COPS3-201ENST00000268717 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
COPS3-201ENST00000268717 HSP90B1P14625 803 aaKnown RBP18.74■□□□□ 0.59
COPS3-201ENST00000268717 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
COPS3-201ENST00000268717 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 AACSQ86V21 672 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 SIL1Q9H173 461 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 EAF2Q96CJ1 260 aaPredicted RBP18.74■□□□□ 0.59
COPS3-201ENST00000268717 FAM89AQ96GI7 184 aa18.74■□□□□ 0.59
COPS3-201ENST00000268717 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
COPS3-201ENST00000268717 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
COPS3-201ENST00000268717 REC8O95072 547 aa18.73■□□□□ 0.59
COPS3-201ENST00000268717 DPEP1P16444 411 aa18.73■□□□□ 0.59
COPS3-201ENST00000268717 GPTP24298 496 aa18.73■□□□□ 0.59
COPS3-201ENST00000268717 CNTROBQ8N137 903 aa18.73■□□□□ 0.59
COPS3-201ENST00000268717 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
COPS3-201ENST00000268717 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
COPS3-201ENST00000268717 EYA2O00167 538 aa18.72■□□□□ 0.59
COPS3-201ENST00000268717 YY1P25490 414 aa18.72■□□□□ 0.59
COPS3-201ENST00000268717 CCDC57Q2TAC2 916 aa18.72■□□□□ 0.59
COPS3-201ENST00000268717 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
COPS3-201ENST00000268717 ANKRD31Q8N7Z5 1873 aa18.72■□□□□ 0.59
COPS3-201ENST00000268717 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 PDE8AO60658 829 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 CTSWP56202 376 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 BECN1Q14457 450 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 ATG9AQ7Z3C6 839 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
COPS3-201ENST00000268717 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms