RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.07
CPSF6-201ENST00000266679 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 PTCD1O75127 700 aaKnown RBP15.51■□□□□ 0.07
CPSF6-201ENST00000266679 FSD1Q9BTV5 496 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 LIMCH1Q9UPQ0 1083 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 PLEKHG2Q9H7P9 1386 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 R3HDM1Q15032 1099 aaKnown RBP15.51■□□□□ 0.07
CPSF6-201ENST00000266679 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 UBE3BQ7Z3V4 1068 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 CAMKK2Q96RR4 588 aa15.51■□□□□ 0.07
CPSF6-201ENST00000266679 WDR33Q9C0J8 1336 aaKnown RBP15.51■□□□□ 0.07
CPSF6-201ENST00000266679 LARGE1O95461 756 aa15.5■□□□□ 0.07
CPSF6-201ENST00000266679 DDX54Q8TDD1 881 aaKnown RBP15.5■□□□□ 0.07
CPSF6-201ENST00000266679 CARD10Q9BWT7 1032 aa15.5■□□□□ 0.07
CPSF6-201ENST00000266679 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
CPSF6-201ENST00000266679 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
CPSF6-201ENST00000266679 TCHHQ07283 1943 aa15.5■□□□□ 0.07
CPSF6-201ENST00000266679 HIP1O00291 1037 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 KCNJ4P48050 445 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
CPSF6-201ENST00000266679 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 RBM8AQ9Y5S9 174 aaKnown RBP15.49■□□□□ 0.07
CPSF6-201ENST00000266679 A0A0D9SFI3 127 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 MBD3O95983 291 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 TRIM44Q96DX7 344 aaPredicted RBP15.49■□□□□ 0.07
CPSF6-201ENST00000266679 GDPD2Q9HCC8 539 aa15.49■□□□□ 0.07
CPSF6-201ENST00000266679 RFX5P48382 616 aaPredicted RBP15.48■□□□□ 0.07
CPSF6-201ENST00000266679 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
CPSF6-201ENST00000266679 A0A087WZG4 1122 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
CPSF6-201ENST00000266679 CCDC173Q0VFZ6 552 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 TFCP2Q12800 502 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 CREB3L3Q68CJ9 461 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 KCNB2Q92953 911 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 RBSNQ9H1K0 784 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 COPRSQ9NQ92 184 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 SMC3Q9UQE7 1217 aa15.48■□□□□ 0.07
CPSF6-201ENST00000266679 TJP1Q07157 1748 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 SYCE3A1L190 88 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 PTPN12Q05209 780 aaKnown RBP15.47■□□□□ 0.07
CPSF6-201ENST00000266679 NECTIN1Q15223 517 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 CCDC83Q8IWF9 413 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 EDC3Q96F86 508 aaKnown RBP15.47■□□□□ 0.07
CPSF6-201ENST00000266679 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.47■□□□□ 0.07
CPSF6-201ENST00000266679 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 PAPPAQ13219 1627 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 SHANK3Q9BYB0 1731 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 PCDH11XQ9BZA7 1347 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 PCDH11YQ9BZA8 1340 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 LRP5O75197 1615 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 DTNBO60941 627 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 ZSWIM6Q9HCJ5 1215 aa15.47■□□□□ 0.07
CPSF6-201ENST00000266679 TNS2Q63HR2 1409 aa15.46■□□□□ 0.07
CPSF6-201ENST00000266679 MED23Q9ULK4 1368 aa15.46■□□□□ 0.07
CPSF6-201ENST00000266679 ERBB4Q15303 1308 aa15.46■□□□□ 0.07
CPSF6-201ENST00000266679 ZKSCAN1P17029 563 aaPredicted RBP15.46■□□□□ 0.07
CPSF6-201ENST00000266679 RABL6Q3YEC7 729 aaPredicted RBP15.46■□□□□ 0.07
CPSF6-201ENST00000266679 TNNI3KQ59H18 835 aa15.46■□□□□ 0.07
CPSF6-201ENST00000266679 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.07
CPSF6-201ENST00000266679 TM6SF1Q9BZW5 370 aa15.46■□□□□ 0.07
CPSF6-201ENST00000266679 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
CPSF6-201ENST00000266679 FPGT-TNNI3KV9GXZ4 949 aa15.46■□□□□ 0.07
CPSF6-201ENST00000266679 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 SLC27A2O14975 620 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 GADD45BO75293 160 aaPredicted RBP15.45■□□□□ 0.06
CPSF6-201ENST00000266679 ZSCAN22P10073 491 aaPredicted RBP15.45■□□□□ 0.06
CPSF6-201ENST00000266679 NBPF14Q5TI25 921 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
CPSF6-201ENST00000266679 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 ZCRB1Q8TBF4 217 aaKnown RBP15.45■□□□□ 0.06
CPSF6-201ENST00000266679 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 CHMP3Q9Y3E7 222 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 LRSAM1Q6UWE0 723 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 NDUFB9Q9Y6M9 179 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 COL15A1P39059 1388 aa15.45■□□□□ 0.06
CPSF6-201ENST00000266679 STX6O43752 255 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 SYT1P21579 422 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 CASP7P55210 303 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 ZNF589Q86UQ0 364 aaPredicted RBP15.44■□□□□ 0.06
CPSF6-201ENST00000266679 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 PPP1R9BQ96SB3 815 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 SNRKQ9NRH2 765 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 RGPD3A6NKT7 1758 aaPredicted RBP15.44■□□□□ 0.06
CPSF6-201ENST00000266679 RGPD4Q7Z3J3 1758 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 ESPNB1AK53 854 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 GJB2P29033 226 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 ZSCAN31Q96LW9 406 aaPredicted RBP15.44■□□□□ 0.06
CPSF6-201ENST00000266679 CNPY2Q9Y2B0 182 aa15.44■□□□□ 0.06
CPSF6-201ENST00000266679 NHSQ6T4R5 1651 aa15.43■□□□□ 0.06
CPSF6-201ENST00000266679 COL9A3Q14050 684 aaPredicted RBP15.43■□□□□ 0.06
CPSF6-201ENST00000266679 LMBR1LQ6UX01 489 aa15.43■□□□□ 0.06
CPSF6-201ENST00000266679 DBNDD2Q9BQY9 259 aa15.43■□□□□ 0.06
CPSF6-201ENST00000266679 EXOC5O00471 708 aa15.43■□□□□ 0.06
CPSF6-201ENST00000266679 ATP5JP18859 108 aa15.43■□□□□ 0.06
CPSF6-201ENST00000266679 CLCN1P35523 988 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms