RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 A0A0D9SFI3 127 aa20.36■□□□□ 0.85
CHKA-201ENST00000265689 BAG4O95429 457 aaKnown RBP20.36■□□□□ 0.85
CHKA-201ENST00000265689 CLEC17AQ6ZS10 378 aa20.36■□□□□ 0.85
CHKA-201ENST00000265689 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
CHKA-201ENST00000265689 ZDHHC9Q9Y397 364 aa20.35■□□□□ 0.85
CHKA-201ENST00000265689 CCDC171Q6TFL3 1326 aa20.35■□□□□ 0.85
CHKA-201ENST00000265689 CYP19A1P11511 503 aaPredicted RBP20.34■□□□□ 0.85
CHKA-201ENST00000265689 LRRC24Q50LG9 513 aa20.34■□□□□ 0.85
CHKA-201ENST00000265689 CPA1P15085 419 aa20.33■□□□□ 0.85
CHKA-201ENST00000265689 ITPK1Q13572 414 aa20.33■□□□□ 0.85
CHKA-201ENST00000265689 HLFQ16534 295 aa20.33■□□□□ 0.85
CHKA-201ENST00000265689 FAM89AQ96GI7 184 aa20.33■□□□□ 0.85
CHKA-201ENST00000265689 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
CHKA-201ENST00000265689 TTC14Q96N46 770 aa20.33■□□□□ 0.85
CHKA-201ENST00000265689 CDCA7Q9BWT1 371 aaPredicted RBP20.33■□□□□ 0.85
CHKA-201ENST00000265689 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
CHKA-201ENST00000265689 TRIM28Q13263 835 aaKnown RBP20.33■□□□□ 0.84
CHKA-201ENST00000265689 NEUROD6Q96NK8 337 aa20.33■□□□□ 0.84
CHKA-201ENST00000265689 DNAJC2Q99543 621 aaKnown RBP20.33■□□□□ 0.84
CHKA-201ENST00000265689 PUS3Q9BZE2 481 aaKnown RBP20.33■□□□□ 0.84
CHKA-201ENST00000265689 TBC1D2BQ9UPU7 963 aa20.33■□□□□ 0.84
CHKA-201ENST00000265689 ATP6V1AP38606 617 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 TIMM10P62072 90 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 ADCK5Q3MIX3 580 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
CHKA-201ENST00000265689 EYA2O00167 538 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 CASTP20810 708 aaKnown RBP20.32■□□□□ 0.84
CHKA-201ENST00000265689 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
CHKA-201ENST00000265689 NECTIN1Q15223 517 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 LARP6Q9BRS8 491 aaKnown RBP20.32■□□□□ 0.84
CHKA-201ENST00000265689 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
CHKA-201ENST00000265689 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
CHKA-201ENST00000265689 GPTP24298 496 aa20.31■□□□□ 0.84
CHKA-201ENST00000265689 GIGYF2Q6Y7W6 1299 aaKnown RBP20.31■□□□□ 0.84
CHKA-201ENST00000265689 MAP4K1Q92918 833 aa20.31■□□□□ 0.84
CHKA-201ENST00000265689 CCDC85AQ96PX6 553 aaPredicted RBP20.31■□□□□ 0.84
CHKA-201ENST00000265689 SNRKQ9NRH2 765 aa20.31■□□□□ 0.84
CHKA-201ENST00000265689 PCCAP05165 728 aaPredicted RBP20.31■□□□□ 0.84
CHKA-201ENST00000265689 AK2P54819 239 aa20.31■□□□□ 0.84
CHKA-201ENST00000265689 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
CHKA-201ENST00000265689 KCNB2Q92953 911 aa20.31■□□□□ 0.84
CHKA-201ENST00000265689 INTS4Q96HW7 963 aaKnown RBP20.31■□□□□ 0.84
CHKA-201ENST00000265689 JAKMIP1Q96N16 626 aaKnown RBP20.31■□□□□ 0.84
CHKA-201ENST00000265689 CHGBP05060 677 aa20.3■□□□□ 0.84
CHKA-201ENST00000265689 KCNJ4P48050 445 aa20.3■□□□□ 0.84
CHKA-201ENST00000265689 HAUS7Q99871 368 aa20.3■□□□□ 0.84
CHKA-201ENST00000265689 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
CHKA-201ENST00000265689 CREB3L3Q68CJ9 461 aa20.3■□□□□ 0.84
CHKA-201ENST00000265689 MCTP1Q6DN14 999 aa20.3■□□□□ 0.84
CHKA-201ENST00000265689 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
CHKA-201ENST00000265689 MED23Q9ULK4 1368 aa20.3■□□□□ 0.84
CHKA-201ENST00000265689 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 GOLGA6L22H0YM25 854 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 SIK1P57059 783 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 RUFY3Q7L099 469 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 ZBTB38Q8NAP3 1195 aaPredicted RBP20.29■□□□□ 0.84
CHKA-201ENST00000265689 CCDC57Q2TAC2 916 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
CHKA-201ENST00000265689 GPR108Q9NPR9 543 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 PALLDQ8WX93 1383 aa20.29■□□□□ 0.84
CHKA-201ENST00000265689 PTMSP20962 102 aa20.28■□□□□ 0.84
CHKA-201ENST00000265689 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
CHKA-201ENST00000265689 CIAO1O76071 339 aa20.28■□□□□ 0.84
CHKA-201ENST00000265689 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.84
CHKA-201ENST00000265689 NLRP10Q86W26 655 aa20.27■□□□□ 0.84
CHKA-201ENST00000265689 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
CHKA-201ENST00000265689 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.84
CHKA-201ENST00000265689 SLC27A2O14975 620 aa20.27■□□□□ 0.84
CHKA-201ENST00000265689 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
CHKA-201ENST00000265689 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
CHKA-201ENST00000265689 A0A1B0GUL7 405 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 PLA2G12BQ9BX93 195 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 LIMCH1Q9UPQ0 1083 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 ZNF609O15014 1411 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 CRKLP46109 303 aaKnown RBP20.26■□□□□ 0.83
CHKA-201ENST00000265689 SEC62Q99442 399 aaKnown RBP20.26■□□□□ 0.83
CHKA-201ENST00000265689 TM6SF1Q9BZW5 370 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 SRCAPQ6ZRS2 3230 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 UTRNP46939 3433 aa20.26■□□□□ 0.83
CHKA-201ENST00000265689 TAF5LO75529 589 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 CSF1RP07333 972 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
CHKA-201ENST00000265689 INTS5Q6P9B9 1019 aaKnown RBP20.25■□□□□ 0.83
CHKA-201ENST00000265689 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 CYP46A1Q9Y6A2 500 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 TAF6LQ9Y6J9 622 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 GOLIM4O00461 696 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 BRD1O95696 1058 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
CHKA-201ENST00000265689 LARGE1O95461 756 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 HSP90AB3PQ58FF7 597 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 DZIP3Q86Y13 1208 aaKnown RBP20.24■□□□□ 0.83
CHKA-201ENST00000265689 THSD7AQ9UPZ6 1657 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 FSD2A1L4K1 749 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 IFIT5Q13325 482 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms