RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SLX4Q8IY92 1834 aa10.71□□□□□ -0.69
ERCC8-201ENST00000265038 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.69
ERCC8-201ENST00000265038 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
ERCC8-201ENST00000265038 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
ERCC8-201ENST00000265038 SLC4A10Q6U841 1118 aa10.71□□□□□ -0.69
ERCC8-201ENST00000265038 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
ERCC8-201ENST00000265038 ANKRD36CQ5JPF3 1778 aa10.71□□□□□ -0.69
ERCC8-201ENST00000265038 SP8Q8IXZ3 490 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 CCDC85AQ96PX6 553 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-201ENST00000265038 PLA2G12BQ9BX93 195 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
ERCC8-201ENST00000265038 ARFGEF1Q9Y6D6 1849 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 ALDH1L1O75891 902 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 CTSWP56202 376 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 TTLL11Q8NHH1 800 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 ZNF526Q8TF50 670 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-201ENST00000265038 PSMD1Q99460 953 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
ERCC8-201ENST00000265038 ZNF277Q9NRM2 450 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-201ENST00000265038 RPS8P62241 208 aaKnown RBP10.69□□□□□ -0.7
ERCC8-201ENST00000265038 CCDC152Q4G0S7 254 aa10.69□□□□□ -0.7
ERCC8-201ENST00000265038 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
ERCC8-201ENST00000265038 CSF1RP07333 972 aa10.68□□□□□ -0.7
ERCC8-201ENST00000265038 GRM8O00222 908 aa10.68□□□□□ -0.7
ERCC8-201ENST00000265038 BCAR3O75815 825 aa10.68□□□□□ -0.7
ERCC8-201ENST00000265038 FOXO4P98177 505 aa10.68□□□□□ -0.7
ERCC8-201ENST00000265038 TMC4Q7Z404 712 aa10.68□□□□□ -0.7
ERCC8-201ENST00000265038 RTFDC1Q9BY42 306 aaPredicted RBP10.68□□□□□ -0.7
ERCC8-201ENST00000265038 GREM2Q9H772 168 aa10.68□□□□□ -0.7
ERCC8-201ENST00000265038 GPBP1L1Q9HC44 474 aaPredicted RBP10.68□□□□□ -0.7
ERCC8-201ENST00000265038 IARSP41252 1262 aaKnown RBP10.67□□□□□ -0.7
ERCC8-201ENST00000265038 EPHA10Q5JZY3 1008 aa10.67□□□□□ -0.7
ERCC8-201ENST00000265038 MPNDQ8N594 471 aa10.67□□□□□ -0.7
ERCC8-201ENST00000265038 TMX4Q9H1E5 349 aaPredicted RBP10.67□□□□□ -0.7
ERCC8-201ENST00000265038 C9orf78Q9NZ63 289 aaPredicted RBP10.67□□□□□ -0.7
ERCC8-201ENST00000265038 ZC3H4Q9UPT8 1303 aaKnown RBP10.67□□□□□ -0.7
ERCC8-201ENST00000265038 COL4A1P02462 1669 aa10.67□□□□□ -0.7
ERCC8-201ENST00000265038 CHD4Q14839 1912 aa10.67□□□□□ -0.7
ERCC8-201ENST00000265038 NBPF7P0C2Y1 421 aaPredicted RBP10.67□□□□□ -0.7
ERCC8-201ENST00000265038 UTYO14607 1347 aa10.66□□□□□ -0.7
ERCC8-201ENST00000265038 DDX60Q8IY21 1712 aaKnown RBP10.66□□□□□ -0.7
ERCC8-201ENST00000265038 GPSM2P81274 684 aa10.66□□□□□ -0.7
ERCC8-201ENST00000265038 DPP8Q6V1X1 898 aaPredicted RBP10.66□□□□□ -0.7
ERCC8-201ENST00000265038 ANKRD18AQ8IVF6 992 aa10.66□□□□□ -0.7
ERCC8-201ENST00000265038 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
ERCC8-201ENST00000265038 API5Q9BZZ5 524 aaKnown RBP10.66□□□□□ -0.7
ERCC8-201ENST00000265038 RTL9Q8NET4 1388 aa10.66□□□□□ -0.7
ERCC8-201ENST00000265038 GLTPD2A6NH11 291 aa10.65□□□□□ -0.7
ERCC8-201ENST00000265038 FAM161AQ3B820 660 aa10.65□□□□□ -0.7
ERCC8-201ENST00000265038 ARHGAP45Q92619 1136 aa10.65□□□□□ -0.7
ERCC8-201ENST00000265038 SUCLG2Q96I99 432 aa10.65□□□□□ -0.7
ERCC8-201ENST00000265038 USP44Q9H0E7 712 aa10.65□□□□□ -0.7
ERCC8-201ENST00000265038 NMRK2Q9NPI5 230 aa10.65□□□□□ -0.7
ERCC8-201ENST00000265038 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.7
ERCC8-201ENST00000265038 KIF3CO14782 793 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 ITGA6P23229 1130 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 AOC3Q16853 763 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 LMBR1LQ6UX01 489 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 CDC5LQ99459 802 aaKnown RBP10.65□□□□□ -0.71
ERCC8-201ENST00000265038 VPS33BQ9H267 617 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 POLLQ9UGP5 575 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 TNNQ9UQP3 1299 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 KIF16BQ96L93 1317 aa10.65□□□□□ -0.71
ERCC8-201ENST00000265038 FZD9O00144 591 aa10.64□□□□□ -0.71
ERCC8-201ENST00000265038 CCT4P50991 539 aaKnown RBP10.64□□□□□ -0.71
ERCC8-201ENST00000265038 LARGE2Q8N3Y3 721 aa10.64□□□□□ -0.71
ERCC8-201ENST00000265038 RRAGCQ9HB90 399 aa10.64□□□□□ -0.71
ERCC8-201ENST00000265038 BSDC1Q9NW68 430 aaPredicted RBP10.64□□□□□ -0.71
ERCC8-201ENST00000265038 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
ERCC8-201ENST00000265038 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
ERCC8-201ENST00000265038 KDM2BQ8NHM5 1336 aa10.64□□□□□ -0.71
ERCC8-201ENST00000265038 PPIP5K2O43314 1243 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 DDNO94850 711 aaPredicted RBP10.63□□□□□ -0.71
ERCC8-201ENST00000265038 TRIM27P14373 513 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 DPY19L2Q6NUT2 758 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 MINPP1Q9UNW1 487 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 LAMB2P55268 1798 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 IPO8O15397 1037 aaKnown RBP10.63□□□□□ -0.71
ERCC8-201ENST00000265038 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 TBC1D16Q8TBP0 767 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 JDP2Q8WYK2 163 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 FRAT1Q92837 279 aaPredicted RBP10.63□□□□□ -0.71
ERCC8-201ENST00000265038 COL4A5P29400 1685 aa10.63□□□□□ -0.71
ERCC8-201ENST00000265038 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
ERCC8-201ENST00000265038 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 POTECB2RU33 542 aa10.62□□□□□ -0.71
ERCC8-201ENST00000265038 IGHMBP2P38935 993 aaKnown RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 IFIT5Q13325 482 aaKnown RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 RABL6Q3YEC7 729 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 INTS3Q68E01 1043 aaKnown RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 ANKRD44Q8N8A2 993 aa10.62□□□□□ -0.71
ERCC8-201ENST00000265038 GPR101Q96P66 508 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 BICC1Q9H694 974 aaKnown RBP10.62□□□□□ -0.71
ERCC8-201ENST00000265038 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
ERCC8-201ENST00000265038 CACNA1FO60840 1977 aa10.62□□□□□ -0.71
ERCC8-201ENST00000265038 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
ERCC8-201ENST00000265038 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms