RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 GRIN3BO60391 1043 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 CTSWP56202 376 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 EPHA10Q5JZY3 1008 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 GREM2Q9H772 168 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 PPEF1O14829 653 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 PDE8AO60658 829 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 CASP7P55210 303 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 RBM17Q96I25 401 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
DEPDC1B-201ENST00000265036 H7C1W4 665 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 RLBP1P12271 317 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 PRELPP51888 382 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 ATF7IPQ6VMQ6 1270 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 ZNF526Q8TF50 670 aaPredicted RBP9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 API5Q9BZZ5 524 aaKnown RBP9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 RCAN3Q9UKA8 241 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 HOXA10P31260 410 aaPredicted RBP9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 ZKSCAN2Q63HK3 967 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 TTLL11Q8NHH1 800 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 PANK1Q8TE04 598 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 SUCLG2Q96I99 432 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 MEIS3Q99687 375 aa9.15□□□□□ -0.94
DEPDC1B-201ENST00000265036 TIAM2Q8IVF5 1701 aa9.15□□□□□ -0.95
DEPDC1B-201ENST00000265036 YY1P25490 414 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 ALDH1B1P30837 517 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 GRAPQ13588 217 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 TMEM57Q8N5G2 664 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 GRAPLQ8TC17 118 aaPredicted RBP9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 GPR101Q96P66 508 aaPredicted RBP9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 ZNF277Q9NRM2 450 aaPredicted RBP9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 RNF181Q9P0P0 153 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 ALDH1L1O75891 902 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 SF3B3Q15393 1217 aaKnown RBP9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 CCDC93Q567U6 631 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 LMBR1LQ6UX01 489 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 C7orf43Q8WVR3 580 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 KAZALD1Q96I82 304 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 TAOK3Q9H2K8 898 aa9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 BICC1Q9H694 974 aaKnown RBP9.14□□□□□ -0.95
DEPDC1B-201ENST00000265036 ITGA6P23229 1130 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 BRPF1P55201 1214 aaPredicted RBP9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 C9orf131Q5VYM1 1079 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 ITPRIPQ8IWB1 547 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 CRAMP1Q96RY5 1269 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 IPO8O15397 1037 aaKnown RBP9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 CCT4P50991 539 aaKnown RBP9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 FOXO4P98177 505 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 KLHDC4Q8TBB5 520 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
DEPDC1B-201ENST00000265036 COL4A5P29400 1685 aa9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 WTIPA6NIX2 430 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 LRRFIP2Q9Y608 721 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 SNED1Q8TER0 1413 aa9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 CEP350Q5VT06 3117 aa9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 UBTFL1P0CB47 393 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 RPS8P62241 208 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 C20orf194Q5TEA3 1177 aa9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 ATP6V0A2Q9Y487 856 aa9.12□□□□□ -0.95
DEPDC1B-201ENST00000265036 HSP90B1P14625 803 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 ANKRD18AQ8IVF6 992 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 DZIP1LQ8IYY4 767 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 ARHGAP45Q92619 1136 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 SNAP23O00161 211 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 TAF7LQ5H9L4 462 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 DPP8Q6V1X1 898 aaPredicted RBP9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 ANKRD44Q8N8A2 993 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 PLA2G12BQ9BX93 195 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 DICER1Q9UPY3 1922 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 PCNTO95613 3336 aa9.11□□□□□ -0.95
DEPDC1B-201ENST00000265036 A0A1B0GUL6 1792 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 LMNB1P20700 586 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 GPSM2P81274 684 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 IFIT5Q13325 482 aaKnown RBP9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 AOC3Q16853 763 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 INTS3Q68E01 1043 aaKnown RBP9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 HELBQ8NG08 1087 aaPredicted RBP9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 TMX4Q9H1E5 349 aaPredicted RBP9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 ANKIB1Q9P2G1 1089 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 LTBP1Q14766 1721 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 BBOX1O75936 387 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 CSF1RP07333 972 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 CCDC57Q2TAC2 916 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 MPNDQ8N594 471 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 UTYO14607 1347 aa9.1□□□□□ -0.95
DEPDC1B-201ENST00000265036 C6orf229H3BNL8 230 aa9.09□□□□□ -0.95
DEPDC1B-201ENST00000265036 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
DEPDC1B-201ENST00000265036 PPIP5K2O43314 1243 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms