RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 A0A087WZG4 1122 aa11.34□□□□□ -0.59
SIM1-201ENST00000262901 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
SIM1-201ENST00000262901 MBD3O95983 291 aa11.34□□□□□ -0.59
SIM1-201ENST00000262901 ANAPC15P60006 121 aa11.34□□□□□ -0.59
SIM1-201ENST00000262901 TSHZ3Q63HK5 1081 aa11.34□□□□□ -0.59
SIM1-201ENST00000262901 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
SIM1-201ENST00000262901 CPLX1O14810 134 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 ALDH1L1O75891 902 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
SIM1-201ENST00000262901 STK3Q13188 491 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 SPC24Q8NBT2 197 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 LINS1Q8NG48 757 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 AK7Q96M32 723 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 CCAR2Q8N163 923 aaKnown RBP11.33□□□□□ -0.6
SIM1-201ENST00000262901 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 RASSF8Q8NHQ8 419 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
SIM1-201ENST00000262901 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
SIM1-201ENST00000262901 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 CWC27Q6UX04 472 aaKnown RBP11.32□□□□□ -0.6
SIM1-201ENST00000262901 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
SIM1-201ENST00000262901 COL18A1P39060 1754 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 ABCC4O15439 1325 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 SYCE3A1L190 88 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 CCDC173Q0VFZ6 552 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
SIM1-201ENST00000262901 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 GPATCH11Q8N954 259 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 PLBD2Q8NHP8 589 aa11.32□□□□□ -0.6
SIM1-201ENST00000262901 GEMIN8Q9NWZ8 242 aaKnown RBP11.32□□□□□ -0.6
SIM1-201ENST00000262901 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.32□□□□□ -0.6
SIM1-201ENST00000262901 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
SIM1-201ENST00000262901 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 KCNQ2O43526 872 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 ZPR1O75312 459 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 PROSER3Q2NL68 480 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
SIM1-201ENST00000262901 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
SIM1-201ENST00000262901 MEIS3Q99687 375 aa11.31□□□□□ -0.6
SIM1-201ENST00000262901 ATP5J2-PTCD1G3V325 749 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 MCM2P49736 904 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 TAF3Q5VWG9 929 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
SIM1-201ENST00000262901 CBX1P83916 185 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 LRP6O75581 1613 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 TRIM37O94972 964 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
SIM1-201ENST00000262901 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 CCDC39Q9UFE4 941 aa11.3□□□□□ -0.6
SIM1-201ENST00000262901 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
SIM1-201ENST00000262901 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 CCDC94Q9BW85 323 aaPredicted RBP11.29□□□□□ -0.6
SIM1-201ENST00000262901 TRIM5Q9C035 493 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
SIM1-201ENST00000262901 TBC1D2BQ9UPU7 963 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
SIM1-201ENST00000262901 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
SIM1-201ENST00000262901 ABCA3Q99758 1704 aa11.29□□□□□ -0.6
SIM1-201ENST00000262901 GRM8O00222 908 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 APBA3O96018 575 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
SIM1-201ENST00000262901 CCDC73Q6ZRK6 1079 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 BCL9O00512 1426 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 ZNF500O60304 480 aaPredicted RBP11.28□□□□□ -0.6
SIM1-201ENST00000262901 CAPN2P17655 700 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 GPTP24298 496 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
SIM1-201ENST00000262901 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 GNPATO15228 680 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 RFC4P35249 363 aa11.28□□□□□ -0.6
SIM1-201ENST00000262901 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
SIM1-201ENST00000262901 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
SIM1-201ENST00000262901 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.6
SIM1-201ENST00000262901 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 HOMER1Q86YM7 354 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 C16orf71Q8IYS4 520 aaPredicted RBP11.27□□□□□ -0.61
SIM1-201ENST00000262901 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
SIM1-201ENST00000262901 CRYBG1Q9Y4K1 1723 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 MX1P20591 662 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 TTLL7Q6ZT98 887 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.61
SIM1-201ENST00000262901 CYP46A1Q9Y6A2 500 aa11.27□□□□□ -0.61
SIM1-201ENST00000262901 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.61
SIM1-201ENST00000262901 TRDNQ13061 729 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 AACSQ86V21 672 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 CCDC34Q96HJ3 373 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms