RNA–Protein interactions for RNA: ENST00000262193.6

PSMB1-201, Transcript of proteasome subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB1-201ENST00000262193 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
PSMB1-201ENST00000262193 PLA2G12BQ9BX93 195 aa13.95□□□□□ -0.18
PSMB1-201ENST00000262193 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
PSMB1-201ENST00000262193 UTYO14607 1347 aa13.94□□□□□ -0.18
PSMB1-201ENST00000262193 C21orf2O43822 256 aa13.94□□□□□ -0.18
PSMB1-201ENST00000262193 NBPF7P0C2Y1 421 aaPredicted RBP13.94□□□□□ -0.18
PSMB1-201ENST00000262193 TAF1P21675 1872 aa13.94□□□□□ -0.18
PSMB1-201ENST00000262193 CCDC152Q4G0S7 254 aa13.94□□□□□ -0.18
PSMB1-201ENST00000262193 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
PSMB1-201ENST00000262193 GRAPQ13588 217 aa13.93□□□□□ -0.18
PSMB1-201ENST00000262193 DZIP1LQ8IYY4 767 aaKnown RBP13.93□□□□□ -0.18
PSMB1-201ENST00000262193 TMEM57Q8N5G2 664 aa13.93□□□□□ -0.18
PSMB1-201ENST00000262193 TTLL11Q8NHH1 800 aa13.93□□□□□ -0.18
PSMB1-201ENST00000262193 GRAPLQ8TC17 118 aaPredicted RBP13.93□□□□□ -0.18
PSMB1-201ENST00000262193 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
PSMB1-201ENST00000262193 COL4A1P02462 1669 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 PPEF1O14829 653 aaPredicted RBP13.92□□□□□ -0.18
PSMB1-201ENST00000262193 RLBP1P12271 317 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 ARHGAP27Q6ZUM4 889 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 C7orf43Q8WVR3 580 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 GREM2Q9H772 168 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
PSMB1-201ENST00000262193 PLIN1O60240 522 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
PSMB1-201ENST00000262193 MS4A1P11836 297 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 FOXO4P98177 505 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 CCDC93Q567U6 631 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 SOGA3Q5TF21 947 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
PSMB1-201ENST00000262193 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
PSMB1-201ENST00000262193 MEIS3Q99687 375 aa13.91□□□□□ -0.18
PSMB1-201ENST00000262193 BBOX1O75936 387 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 CSF1RP07333 972 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 SLC51AQ86UW1 340 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 ITPRIPQ8IWB1 547 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 BICC1Q9H694 974 aaKnown RBP13.9□□□□□ -0.18
PSMB1-201ENST00000262193 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
PSMB1-201ENST00000262193 FER1L6Q2WGJ9 1857 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
PSMB1-201ENST00000262193 NFKBIEO00221 500 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 GNAI3P08754 354 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
PSMB1-201ENST00000262193 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 ANKRD44Q8N8A2 993 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
PSMB1-201ENST00000262193 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 LRRC37AA6NMS7 1700 aa13.89□□□□□ -0.19
PSMB1-201ENST00000262193 CHD4Q14839 1912 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 SPEF2Q9C093 1822 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 ITGA6P23229 1130 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 RASSF7Q02833 373 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 IFIT5Q13325 482 aaKnown RBP13.88□□□□□ -0.19
PSMB1-201ENST00000262193 RABL6Q3YEC7 729 aaPredicted RBP13.88□□□□□ -0.19
PSMB1-201ENST00000262193 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
PSMB1-201ENST00000262193 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
PSMB1-201ENST00000262193 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
PSMB1-201ENST00000262193 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
PSMB1-201ENST00000262193 SP8Q8IXZ3 490 aa13.87□□□□□ -0.19
PSMB1-201ENST00000262193 RTKN2Q8IZC4 609 aa13.87□□□□□ -0.19
PSMB1-201ENST00000262193 LTBP3Q9NS15 1303 aa13.87□□□□□ -0.19
PSMB1-201ENST00000262193 IGHMBP2P38935 993 aaKnown RBP13.86□□□□□ -0.19
PSMB1-201ENST00000262193 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
PSMB1-201ENST00000262193 PDE3AQ14432 1141 aa13.86□□□□□ -0.19
PSMB1-201ENST00000262193 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
PSMB1-201ENST00000262193 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
PSMB1-201ENST00000262193 SBF1O95248 1867 aa13.85□□□□□ -0.19
PSMB1-201ENST00000262193 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
PSMB1-201ENST00000262193 GRIPAP1Q4V328 841 aa13.85□□□□□ -0.19
PSMB1-201ENST00000262193 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
PSMB1-201ENST00000262193 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
PSMB1-201ENST00000262193 COG6Q9Y2V7 657 aa13.85□□□□□ -0.19
PSMB1-201ENST00000262193 GNAI2P04899 355 aa13.84□□□□□ -0.19
PSMB1-201ENST00000262193 LMNB1P20700 586 aa13.84□□□□□ -0.19
PSMB1-201ENST00000262193 DPP8Q6V1X1 898 aaPredicted RBP13.84□□□□□ -0.19
PSMB1-201ENST00000262193 MPNDQ8N594 471 aa13.84□□□□□ -0.19
PSMB1-201ENST00000262193 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
PSMB1-201ENST00000262193 PSMD1Q99460 953 aa13.84□□□□□ -0.19
PSMB1-201ENST00000262193 MPHOSPH8Q99549 860 aa13.84□□□□□ -0.19
PSMB1-201ENST00000262193 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
PSMB1-201ENST00000262193 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
PSMB1-201ENST00000262193 DUOX1Q9NRD9 1551 aa13.83□□□□□ -0.19
PSMB1-201ENST00000262193 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
PSMB1-201ENST00000262193 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
PSMB1-201ENST00000262193 PRELPP51888 382 aa13.83□□□□□ -0.2
PSMB1-201ENST00000262193 GPSM2P81274 684 aa13.83□□□□□ -0.2
PSMB1-201ENST00000262193 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
PSMB1-201ENST00000262193 ZNF277Q9NRM2 450 aaPredicted RBP13.83□□□□□ -0.2
PSMB1-201ENST00000262193 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
PSMB1-201ENST00000262193 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms