RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 HABP4Q5JVS0 413 aaKnown RBP17.32■□□□□ 0.36
SGCA-201ENST00000262018 CNOT7Q9UIV1 285 aaKnown RBP17.32■□□□□ 0.36
SGCA-201ENST00000262018 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
SGCA-201ENST00000262018 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
SGCA-201ENST00000262018 H7C1D1 291 aa17.31■□□□□ 0.36
SGCA-201ENST00000262018 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
SGCA-201ENST00000262018 TNIP1Q15025 636 aa17.31■□□□□ 0.36
SGCA-201ENST00000262018 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
SGCA-201ENST00000262018 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
SGCA-201ENST00000262018 KRT26Q7Z3Y9 468 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 CSRNP1Q96S65 589 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 GPTP24298 496 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
SGCA-201ENST00000262018 AKAP11Q9UKA4 1901 aa17.29■□□□□ 0.36
SGCA-201ENST00000262018 PKN2Q16513 984 aaKnown RBP17.29■□□□□ 0.36
SGCA-201ENST00000262018 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
SGCA-201ENST00000262018 SLC10A3P09131 477 aa17.28■□□□□ 0.36
SGCA-201ENST00000262018 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
SGCA-201ENST00000262018 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
SGCA-201ENST00000262018 RTFDC1Q9BY42 306 aaPredicted RBP17.28■□□□□ 0.36
SGCA-201ENST00000262018 ADM5C9JUS6 153 aa17.27■□□□□ 0.35
SGCA-201ENST00000262018 SUSD4Q5VX71 490 aa17.27■□□□□ 0.35
SGCA-201ENST00000262018 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
SGCA-201ENST00000262018 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
SGCA-201ENST00000262018 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
SGCA-201ENST00000262018 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
SGCA-201ENST00000262018 MPNDQ8N594 471 aa17.26■□□□□ 0.35
SGCA-201ENST00000262018 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
SGCA-201ENST00000262018 DCPSQ96C86 337 aaKnown RBP17.25■□□□□ 0.35
SGCA-201ENST00000262018 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
SGCA-201ENST00000262018 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
SGCA-201ENST00000262018 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
SGCA-201ENST00000262018 YDJCA8MPS7 323 aa17.24■□□□□ 0.35
SGCA-201ENST00000262018 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
SGCA-201ENST00000262018 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
SGCA-201ENST00000262018 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
SGCA-201ENST00000262018 KIF6Q6ZMV9 814 aa17.24■□□□□ 0.35
SGCA-201ENST00000262018 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
SGCA-201ENST00000262018 NTSR2O95665 410 aa17.23■□□□□ 0.35
SGCA-201ENST00000262018 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
SGCA-201ENST00000262018 MCM10Q7L590 875 aa17.23■□□□□ 0.35
SGCA-201ENST00000262018 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
SGCA-201ENST00000262018 ZNF296Q8WUU4 475 aaPredicted RBP17.23■□□□□ 0.35
SGCA-201ENST00000262018 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
SGCA-201ENST00000262018 ABCC4O15439 1325 aa17.23■□□□□ 0.35
SGCA-201ENST00000262018 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
SGCA-201ENST00000262018 EGFRP00533 1210 aa17.22■□□□□ 0.35
SGCA-201ENST00000262018 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
SGCA-201ENST00000262018 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
SGCA-201ENST00000262018 DPF2Q92785 391 aa17.22■□□□□ 0.35
SGCA-201ENST00000262018 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
SGCA-201ENST00000262018 NUP98P52948 1817 aa17.22■□□□□ 0.35
SGCA-201ENST00000262018 FBXO46Q6PJ61 603 aaPredicted RBP17.21■□□□□ 0.35
SGCA-201ENST00000262018 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
SGCA-201ENST00000262018 POLR2AP24928 1970 aaKnown RBP17.21■□□□□ 0.35
SGCA-201ENST00000262018 PSMD14O00487 310 aa17.21■□□□□ 0.34
SGCA-201ENST00000262018 BBOX1O75936 387 aa17.21■□□□□ 0.34
SGCA-201ENST00000262018 PRKAR2BP31323 418 aa17.21■□□□□ 0.34
SGCA-201ENST00000262018 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.34
SGCA-201ENST00000262018 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.34
SGCA-201ENST00000262018 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.34
SGCA-201ENST00000262018 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
SGCA-201ENST00000262018 SULF1Q8IWU6 871 aa17.2■□□□□ 0.34
SGCA-201ENST00000262018 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
SGCA-201ENST00000262018 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
SGCA-201ENST00000262018 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
SGCA-201ENST00000262018 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
SGCA-201ENST00000262018 MYL6BP14649 208 aa17.19■□□□□ 0.34
SGCA-201ENST00000262018 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
SGCA-201ENST00000262018 CDCA5Q96FF9 252 aa17.19■□□□□ 0.34
SGCA-201ENST00000262018 APAF1O14727 1248 aa17.18■□□□□ 0.34
SGCA-201ENST00000262018 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
SGCA-201ENST00000262018 MIS18AQ9NYP9 233 aa17.18■□□□□ 0.34
SGCA-201ENST00000262018 GGA3Q9NZ52 723 aa17.18■□□□□ 0.34
SGCA-201ENST00000262018 GPR25O00155 361 aa17.17■□□□□ 0.34
SGCA-201ENST00000262018 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
SGCA-201ENST00000262018 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
SGCA-201ENST00000262018 PARP10Q53GL7 1025 aa17.17■□□□□ 0.34
SGCA-201ENST00000262018 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
SGCA-201ENST00000262018 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
SGCA-201ENST00000262018 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
SGCA-201ENST00000262018 RPS12P25398 132 aaKnown RBP17.16■□□□□ 0.34
SGCA-201ENST00000262018 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
SGCA-201ENST00000262018 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
SGCA-201ENST00000262018 ASTN2O75129 1339 aaPredicted RBP17.16■□□□□ 0.34
SGCA-201ENST00000262018 NEFMP07197 916 aa17.15■□□□□ 0.34
SGCA-201ENST00000262018 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
SGCA-201ENST00000262018 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
SGCA-201ENST00000262018 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
SGCA-201ENST00000262018 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
SGCA-201ENST00000262018 NEFLP07196 543 aa17.14■□□□□ 0.33
SGCA-201ENST00000262018 GRAPQ13588 217 aa17.14■□□□□ 0.33
SGCA-201ENST00000262018 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
SGCA-201ENST00000262018 GRAPLQ8TC17 118 aaPredicted RBP17.14■□□□□ 0.33
SGCA-201ENST00000262018 POTEFA5A3E0 1075 aa17.13■□□□□ 0.33
SGCA-201ENST00000262018 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
SGCA-201ENST00000262018 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms