RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 KIF5BP33176 963 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 WTAPQ15007 396 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 LEKR1Q6ZMV7 388 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 BCCIPQ9P287 314 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPG11-201ENST00000261866 GSTO1P78417 241 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 BRF1Q92994 677 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 ZKSCAN3Q9BRR0 538 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
SPG11-201ENST00000261866 IRS4O14654 1257 aaPredicted RBP14.02□□□□□ -0.16
SPG11-201ENST00000261866 PRPF4BQ13523 1007 aaKnown RBP14.02□□□□□ -0.16
SPG11-201ENST00000261866 ZNF804AQ7Z570 1209 aa14.02□□□□□ -0.16
SPG11-201ENST00000261866 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.16
SPG11-201ENST00000261866 TCP11L1Q9NUJ3 509 aa14.02□□□□□ -0.16
SPG11-201ENST00000261866 ABCC11Q96J66 1382 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 ZNF354CQ86Y25 554 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 UIMC1Q96RL1 719 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 COMMD10Q9Y6G5 202 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.17
SPG11-201ENST00000261866 BIN2Q9UBW5 565 aaPredicted RBP14.02□□□□□ -0.17
SPG11-201ENST00000261866 MAGEB6P1A0A0J9YX57 407 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 TOP1P11387 765 aaKnown RBP14.02□□□□□ -0.17
SPG11-201ENST00000261866 KCNA6P17658 529 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
SPG11-201ENST00000261866 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
SPG11-201ENST00000261866 UQCRHLA0A096LP55 91 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 UQCRHP07919 91 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 AKAP4Q5JQC9 854 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 PLIN2Q99541 437 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 TXLNBQ8N3L3 684 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 CTNNA2P26232 953 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 ZC3H12CQ9C0D7 883 aaKnown RBP14.01□□□□□ -0.17
SPG11-201ENST00000261866 TFCP2Q12800 502 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
SPG11-201ENST00000261866 GRM8O00222 908 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 RBM25P49756 843 aaKnown RBP14.01□□□□□ -0.17
SPG11-201ENST00000261866 JDP2Q8WYK2 163 aa14.01□□□□□ -0.17
SPG11-201ENST00000261866 ZYXQ15942 572 aaKnown RBP14□□□□□ -0.17
SPG11-201ENST00000261866 MCM9Q9NXL9 1143 aa14□□□□□ -0.17
SPG11-201ENST00000261866 TTC22Q5TAA0 569 aa14□□□□□ -0.17
SPG11-201ENST00000261866 MSL1Q68DK7 614 aa14□□□□□ -0.17
SPG11-201ENST00000261866 TSPYL6Q8N831 410 aa14□□□□□ -0.17
SPG11-201ENST00000261866 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
SPG11-201ENST00000261866 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
SPG11-201ENST00000261866 UHRF1BP1LA0JNW5 1464 aa14□□□□□ -0.17
SPG11-201ENST00000261866 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
SPG11-201ENST00000261866 TMCO5BA8MYB1 307 aa14□□□□□ -0.17
SPG11-201ENST00000261866 UQCRFS1P1P0C7P4 283 aa14□□□□□ -0.17
SPG11-201ENST00000261866 NBPF14Q5TI25 921 aa14□□□□□ -0.17
SPG11-201ENST00000261866 CCDC148Q8NFR7 591 aa14□□□□□ -0.17
SPG11-201ENST00000261866 CASQ1P31415 396 aa14□□□□□ -0.17
SPG11-201ENST00000261866 ANO10Q9NW15 660 aa14□□□□□ -0.17
SPG11-201ENST00000261866 HCLS1P14317 486 aaPredicted RBP14□□□□□ -0.17
SPG11-201ENST00000261866 MARCKSP29966 332 aaPredicted RBP14□□□□□ -0.17
SPG11-201ENST00000261866 NF2P35240 595 aa14□□□□□ -0.17
SPG11-201ENST00000261866 UBA7P41226 1012 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 GSTTP1A0A1W2PQM5 241 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 RAB3GAP1Q15042 981 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 Q6ZUG5 572 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
SPG11-201ENST00000261866 NAPAP54920 295 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 TMC6Q7Z403 805 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
SPG11-201ENST00000261866 ORAI2Q96SN7 254 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 NMIQ13287 307 aaPredicted RBP13.99□□□□□ -0.17
SPG11-201ENST00000261866 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
SPG11-201ENST00000261866 GCP02774 474 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 CCDC183Q5T5S1 534 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 SDSP20132 328 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 MCM5P33992 734 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
SPG11-201ENST00000261866 SFPQP23246 707 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPG11-201ENST00000261866 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
SPG11-201ENST00000261866 STX6O43752 255 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 KIAA0754O94854 1291 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 NOP2P46087 812 aaKnown RBP13.98□□□□□ -0.17
SPG11-201ENST00000261866 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 TBCAO75347 108 aaKnown RBP13.98□□□□□ -0.17
SPG11-201ENST00000261866 ALG1Q9BT22 464 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
SPG11-201ENST00000261866 URI1O94763 535 aaPredicted RBP13.98□□□□□ -0.17
SPG11-201ENST00000261866 GJC1P36383 396 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 MAP3K9P80192 1104 aa13.98□□□□□ -0.17
SPG11-201ENST00000261866 ZBTB43O43298 467 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 SMARCC1Q92922 1105 aaPredicted RBP13.97□□□□□ -0.17
SPG11-201ENST00000261866 KIF4BQ2VIQ3 1234 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 SCAND2PQ9GZW5 306 aaPredicted RBP13.97□□□□□ -0.17
SPG11-201ENST00000261866 BICC1Q9H694 974 aaKnown RBP13.97□□□□□ -0.17
SPG11-201ENST00000261866 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 RTN1Q16799 776 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 EYA1Q99502 592 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms