RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.42□□□□□ -1.06
RORA-201ENST00000261523 NOL8Q76FK4 1167 aaKnown RBP8.42□□□□□ -1.06
RORA-201ENST00000261523 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
RORA-201ENST00000261523 RILPL2Q969X0 211 aa8.42□□□□□ -1.06
RORA-201ENST00000261523 USP44Q9H0E7 712 aa8.42□□□□□ -1.06
RORA-201ENST00000261523 ANO2Q9NQ90 1003 aa8.42□□□□□ -1.06
RORA-201ENST00000261523 AOX1Q06278 1338 aa8.42□□□□□ -1.06
RORA-201ENST00000261523 PXDNLA1KZ92 1463 aa8.42□□□□□ -1.06
RORA-201ENST00000261523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
RORA-201ENST00000261523 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 CD2APQ9Y5K6 639 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
RORA-201ENST00000261523 GNAT3A8MTJ3 354 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 GNPATO15228 680 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 GADD45BO75293 160 aaPredicted RBP8.41□□□□□ -1.06
RORA-201ENST00000261523 TERF1P54274 439 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 SSH3Q8TE77 659 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
RORA-201ENST00000261523 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
RORA-201ENST00000261523 HSPA4P34932 840 aa8.4□□□□□ -1.06
RORA-201ENST00000261523 ITPK1Q13572 414 aa8.4□□□□□ -1.06
RORA-201ENST00000261523 RTCBQ9Y3I0 505 aaKnown RBP8.4□□□□□ -1.06
RORA-201ENST00000261523 RPAP1Q9BWH6 1393 aaPredicted RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 EPB41L2O43491 1005 aaKnown RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 PI4K2BQ8TCG2 481 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 SLC52A2Q9HAB3 445 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 IL1RAPL2Q9NP60 686 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 TJP1Q07157 1748 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 GRIN3BO60391 1043 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 PHF14O94880 888 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 UBTFL1P0CB47 393 aaPredicted RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 MCM5P33992 734 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 TAF7Q15545 349 aaPredicted RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 GPR162Q16538 588 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 USP48Q86UV5 1035 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 NFATC2IPQ8NCF5 419 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 CHMP4AQ9BY43 222 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 PHAXQ9H814 394 aaKnown RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
RORA-201ENST00000261523 R3HCC1Q9Y3T6 440 aaKnown RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
RORA-201ENST00000261523 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 C4AP0C0L4 1744 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 WDR33Q9C0J8 1336 aaKnown RBP8.38□□□□□ -1.07
RORA-201ENST00000261523 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
RORA-201ENST00000261523 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
RORA-201ENST00000261523 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
RORA-201ENST00000261523 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 NLGN1Q8N2Q7 840 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 TTC14Q96N46 770 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 SNX14Q9Y5W7 946 aa8.38□□□□□ -1.07
RORA-201ENST00000261523 KDM3BQ7LBC6 1761 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 SGSM2O43147 1006 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
RORA-201ENST00000261523 RPS6KA4O75676 772 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 GLIPR1L2Q4G1C9 344 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 TAF7LQ5H9L4 462 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 LSG1Q9H089 658 aaKnown RBP8.37□□□□□ -1.07
RORA-201ENST00000261523 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 RAD50Q92878 1312 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
RORA-201ENST00000261523 SURF6O75683 361 aaKnown RBP8.37□□□□□ -1.07
RORA-201ENST00000261523 RFC4P35249 363 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 RHPN1Q8TCX5 695 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 SYAP1Q96A49 352 aaPredicted RBP8.37□□□□□ -1.07
RORA-201ENST00000261523 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
RORA-201ENST00000261523 SIPA1L3O60292 1781 aaPredicted RBP8.37□□□□□ -1.07
RORA-201ENST00000261523 HDGFL1Q5TGJ6 251 aa8.36□□□□□ -1.07
RORA-201ENST00000261523 RUFY3Q7L099 469 aa8.36□□□□□ -1.07
RORA-201ENST00000261523 AMIGO3Q86WK7 504 aa8.36□□□□□ -1.07
RORA-201ENST00000261523 USP42Q9H9J4 1324 aaKnown RBP8.36□□□□□ -1.07
RORA-201ENST00000261523 KCPQ6ZWJ8 1503 aa8.36□□□□□ -1.07
RORA-201ENST00000261523 ZSCAN22P10073 491 aaPredicted RBP8.35□□□□□ -1.07
RORA-201ENST00000261523 CRKLP46109 303 aaKnown RBP8.35□□□□□ -1.07
RORA-201ENST00000261523 AK2P54819 239 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 FGD1P98174 961 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 RBM10P98175 930 aaKnown RBP8.35□□□□□ -1.07
RORA-201ENST00000261523 TEFQ10587 303 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 TTC5Q8N0Z6 440 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 NLGN2Q8NFZ4 835 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 KIF1BPQ96EK5 621 aa8.35□□□□□ -1.07
RORA-201ENST00000261523 CNPY2Q9Y2B0 182 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms