RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.66□□□□□ -1.66
RNF38-201ENST00000259605 RIMBP2O15034 1052 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 CCP110O43303 1012 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 LDHBP07195 334 aaKnown RBP4.65□□□□□ -1.66
RNF38-201ENST00000259605 NBPF7P0C2Y1 421 aaPredicted RBP4.65□□□□□ -1.66
RNF38-201ENST00000259605 NBPF1Q3BBV0 1214 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 CCDC93Q567U6 631 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 MAP7D2Q96T17 732 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 ZBTB3Q9H5J0 574 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 UFL1O94874 794 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 KIAA1841Q6NSI8 718 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 RTKN2Q8IZC4 609 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 STK11IPQ8N1F8 1099 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 LMCD1Q9NZU5 365 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 TBX22Q9Y458 520 aa4.65□□□□□ -1.66
RNF38-201ENST00000259605 NDC80O14777 642 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 KCTD2Q14681 263 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 NAA16Q6N069 864 aaPredicted RBP4.65□□□□□ -1.67
RNF38-201ENST00000259605 DAAM2Q86T65 1068 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 ZNF397Q8NF99 534 aaPredicted RBP4.65□□□□□ -1.67
RNF38-201ENST00000259605 PIM2Q9P1W9 311 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 G3BP2Q9UN86 482 aaKnown RBP4.65□□□□□ -1.67
RNF38-201ENST00000259605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.65□□□□□ -1.67
RNF38-201ENST00000259605 SH3BP5O60239 455 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 KRT13P13646 458 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 YY1P25490 414 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 PICALMQ13492 652 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 GNPTABQ3T906 1256 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 FASTKD5Q7L8L6 764 aaKnown RBP4.65□□□□□ -1.67
RNF38-201ENST00000259605 TAF4BQ92750 862 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 PSMD1Q99460 953 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 PLVAPQ9BX97 442 aa4.65□□□□□ -1.67
RNF38-201ENST00000259605 PPIP5K1Q6PFW1 1433 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNF38-201ENST00000259605 MARCKSP29966 332 aaPredicted RBP4.64□□□□□ -1.67
RNF38-201ENST00000259605 ELF1P32519 619 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 GADL1Q6ZQY3 521 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 EXOC8Q8IYI6 725 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 TMTC2Q8N394 836 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 FBXO41Q8TF61 875 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 ATF5Q9Y2D1 282 aaPredicted RBP4.64□□□□□ -1.67
RNF38-201ENST00000259605 ZBBXA8MT70 800 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 DPYSL4O14531 572 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 APAF1O14727 1248 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 KCNJ6P48051 423 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 LMAN1P49257 510 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 PRKG1Q13976 671 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 MCM10Q7L590 875 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 CCDC83Q8IWF9 413 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 ELMOD1Q8N336 334 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 RAET1EQ8TD07 263 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 GOPCQ9HD26 462 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 RAB23Q9ULC3 237 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 TPCN1Q9ULQ1 816 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 CYP46A1Q9Y6A2 500 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 LAMC3Q9Y6N6 1575 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 F8W8V4 182 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 XPOTO43592 962 aaKnown RBP4.64□□□□□ -1.67
RNF38-201ENST00000259605 MFSD14CQ5VZR4 134 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 CCDC191Q8NCU4 936 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 DCAF5Q96JK2 942 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 HAUS7Q99871 368 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 PUF60Q9UHX1 559 aaKnown RBP4.64□□□□□ -1.67
RNF38-201ENST00000259605 RAB11FIP3O75154 756 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 ACTN1P12814 892 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 TMOD1P28289 359 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 NONOQ15233 471 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNF38-201ENST00000259605 SKOR2Q2VWA4 1001 aaPredicted RBP4.64□□□□□ -1.67
RNF38-201ENST00000259605 FKBP15Q5T1M5 1219 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 ENGASEQ8NFI3 743 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 WDR66Q8TBY9 1149 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 STX8Q9UNK0 236 aa4.64□□□□□ -1.67
RNF38-201ENST00000259605 CCDC141Q6ZP82 1450 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 ZBED9Q6R2W3 1325 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 C9orf84Q5VXU9 1444 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 ZFYP08048 801 aaPredicted RBP4.63□□□□□ -1.67
RNF38-201ENST00000259605 XPAP23025 273 aaPredicted RBP4.63□□□□□ -1.67
RNF38-201ENST00000259605 NLRX1Q86UT6 975 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 FTOQ9C0B1 505 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNF38-201ENST00000259605 PTPRCP08575 1304 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 GNAT2P19087 354 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 SREBF2Q12772 1141 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 PTGDRQ13258 359 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 IQCEQ6IPM2 695 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 AEBP1Q8IUX7 1158 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 OTUD6BQ8N6M0 293 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 IFT74Q96LB3 600 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 GTPBP4Q9BZE4 634 aaKnown RBP4.63□□□□□ -1.67
RNF38-201ENST00000259605 DENND2AQ9ULE3 1009 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 SLC12A7Q9Y666 1083 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 EIF4G3O43432 1585 aaKnown RBP4.63□□□□□ -1.67
RNF38-201ENST00000259605 DDX11L8A8MPP1 907 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 ZNF213O14771 459 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 KIF11P52732 1056 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 USP14P54578 494 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 E2F5Q15329 346 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 NBPF20Q3BBV1 942 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 ERFEQ4G0M1 354 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 PPFIBP1Q86W92 1011 aa4.63□□□□□ -1.67
RNF38-201ENST00000259605 SECISBP2LQ93073 1101 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms