RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
TROAP-201ENST00000257909 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
TROAP-201ENST00000257909 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 FHOD1Q9Y613 1164 aa13.49□□□□□ -0.25
TROAP-201ENST00000257909 KCNJ6P48051 423 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 RESTQ13127 1097 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 ST7Q9NRC1 585 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 ARGLU1Q9NWB6 273 aaPredicted RBP13.48□□□□□ -0.25
TROAP-201ENST00000257909 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
TROAP-201ENST00000257909 GNAT3A8MTJ3 354 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 VGLL3A8MV65 326 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 ERCC6LQ2NKX8 1250 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
TROAP-201ENST00000257909 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
TROAP-201ENST00000257909 NRDCO43847 1150 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 CLCN6P51797 869 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 TOB2Q14106 344 aaPredicted RBP13.47□□□□□ -0.25
TROAP-201ENST00000257909 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 DHX40Q8IX18 779 aaKnown RBP13.47□□□□□ -0.25
TROAP-201ENST00000257909 CEP57L1Q8IYX8 460 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 HMG20BQ9P0W2 317 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
TROAP-201ENST00000257909 NBPF7P0C2Y1 421 aaPredicted RBP13.47□□□□□ -0.25
TROAP-201ENST00000257909 PNMA6AP0CW24 399 aaPredicted RBP13.47□□□□□ -0.25
TROAP-201ENST00000257909 TPM4P67936 248 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 HDGFL1Q5TGJ6 251 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 CCDC150Q8NCX0 1101 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.47□□□□□ -0.25
TROAP-201ENST00000257909 ADCY9O60503 1353 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
TROAP-201ENST00000257909 H3BQV1 296 aa13.46□□□□□ -0.25
TROAP-201ENST00000257909 CAPN2P17655 700 aa13.46□□□□□ -0.25
TROAP-201ENST00000257909 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.25
TROAP-201ENST00000257909 TSGA10IPQ3SY00 556 aa13.46□□□□□ -0.25
TROAP-201ENST00000257909 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
TROAP-201ENST00000257909 CCDC73Q6ZRK6 1079 aa13.46□□□□□ -0.25
TROAP-201ENST00000257909 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
TROAP-201ENST00000257909 NPHP1O15259 732 aa13.46□□□□□ -0.26
TROAP-201ENST00000257909 MTX1Q13505 466 aa13.46□□□□□ -0.26
TROAP-201ENST00000257909 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.26
TROAP-201ENST00000257909 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.26
TROAP-201ENST00000257909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.26
TROAP-201ENST00000257909 FLT4P35916 1363 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 ATP8B1O43520 1251 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
TROAP-201ENST00000257909 NMIQ13287 307 aaPredicted RBP13.45□□□□□ -0.26
TROAP-201ENST00000257909 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
TROAP-201ENST00000257909 TMCO3Q6UWJ1 677 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
TROAP-201ENST00000257909 BRF1Q92994 677 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 GTF3C6Q969F1 213 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 PPP1R13BQ96KQ4 1090 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 CHMP4AQ9BY43 222 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 UBR1Q8IWV7 1749 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
TROAP-201ENST00000257909 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 CCP110O43303 1012 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 MLECQ14165 292 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 TXLNBQ8N3L3 684 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 RCOR1Q9UKL0 485 aa13.45□□□□□ -0.26
TROAP-201ENST00000257909 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
TROAP-201ENST00000257909 CEP170BQ9Y4F5 1589 aaPredicted RBP13.44□□□□□ -0.26
TROAP-201ENST00000257909 ZRANB2O95218 330 aaKnown RBP eCLIP13.44□□□□□ -0.267e-6■■■■■ 37.3
TROAP-201ENST00000257909 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 STK3Q13188 491 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 KRT32Q14532 448 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 BEND3Q5T5X7 828 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 ATL3Q6DD88 541 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 SYT10Q6XYQ8 523 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
TROAP-201ENST00000257909 MYH15Q9Y2K3 1946 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 TPM1P09493 284 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 DNAAF4Q8WXU2 420 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 UBXN4Q92575 508 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 EYA1Q99502 592 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 USP6P35125 1406 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 ACEP12821 1306 aa13.44□□□□□ -0.26
TROAP-201ENST00000257909 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 NBPF11Q86T75 865 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 NUTM2FA1L443 756 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 JAK2O60674 1132 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
TROAP-201ENST00000257909 MUM1L1Q5H9M0 696 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 PHLPP2Q6ZVD8 1323 aa13.43□□□□□ -0.26
TROAP-201ENST00000257909 JCADQ9P266 1359 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 ADAMTS13Q76LX8 1427 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
TROAP-201ENST00000257909 RAD51AP2Q09MP3 1159 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 GPS2Q13227 327 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms