RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 C1orf53Q5VUE5 145 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 NYAP1Q6ZVC0 841 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 RELL1Q8IUW5 271 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 SNX29Q8TEQ0 813 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 CDK15Q96Q40 435 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 IRF2BPLQ9H1B7 796 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 R3HCC1Q9Y3T6 440 aaKnown RBP6.92□□□□□ -1.3
TCN1-201ENST00000257264 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
TCN1-201ENST00000257264 S1PR4O95977 384 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 GRM5P41594 1212 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 GORABQ5T7V8 394 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 RPUSD2Q8IZ73 545 aaKnown RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 ZFYVE28Q9HCC9 887 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 DDX56Q9NY93 547 aaKnown RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 ADAMTS1Q9UHI8 967 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 MICAL2O94851 1124 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 ADD1P35611 737 aaKnown RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 COL9A2Q14055 689 aaPredicted RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 CCDC116Q8IYX3 515 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 FAM9AQ8IZU1 332 aaPredicted RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 CPLX3Q8WVH0 158 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 BCO2Q9BYV7 579 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 IL21Q9HBE4 155 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
TCN1-201ENST00000257264 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
TCN1-201ENST00000257264 POTECB2RU33 542 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 GADD45BO75293 160 aaPredicted RBP6.9□□□□□ -1.31
TCN1-201ENST00000257264 S100BP04271 92 aaPredicted RBP6.9□□□□□ -1.31
TCN1-201ENST00000257264 SOX9P48436 509 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 TRIM32Q13049 653 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 HIF1AQ16665 826 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 ARSHQ5FYA8 562 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 TAF7LQ5H9L4 462 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 THSD4Q6ZMP0 1018 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 APPBP2Q92624 585 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 GINM1Q9NU53 330 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 FANCLQ9NW38 375 aa6.9□□□□□ -1.31
TCN1-201ENST00000257264 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 PHACTR2O75167 634 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 GSTT1P30711 240 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
TCN1-201ENST00000257264 RASA3Q14644 834 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 SH3TC2Q8TF17 1288 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 HNRNPLLQ8WVV9 542 aaKnown RBP6.89□□□□□ -1.31
TCN1-201ENST00000257264 ZNF516Q92618 1163 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 NIFKQ9BYG3 293 aaKnown RBP6.89□□□□□ -1.31
TCN1-201ENST00000257264 NPHS2Q9NP85 383 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 PPP4R2Q9NY27 417 aa6.89□□□□□ -1.31
TCN1-201ENST00000257264 TTF2Q9UNY4 1162 aaKnown RBP6.89□□□□□ -1.31
TCN1-201ENST00000257264 MINDY4BA8MYZ0 360 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 MAP4K4O95819 1239 aaPredicted RBP6.88□□□□□ -1.31
TCN1-201ENST00000257264 GBP2P32456 591 aaPredicted RBP6.88□□□□□ -1.31
TCN1-201ENST00000257264 AMPD3Q01432 767 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 CLN3Q13286 438 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 PDE12Q6L8Q7 609 aaKnown RBP6.88□□□□□ -1.31
TCN1-201ENST00000257264 HOMER1Q86YM7 354 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
TCN1-201ENST00000257264 ZNF296Q8WUU4 475 aaPredicted RBP6.88□□□□□ -1.31
TCN1-201ENST00000257264 EAF1Q96JC9 268 aaPredicted RBP6.88□□□□□ -1.31
TCN1-201ENST00000257264 TMEM74Q96NL1 305 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 PRKAG3Q9UGI9 489 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 BCS1LQ9Y276 419 aa6.88□□□□□ -1.31
TCN1-201ENST00000257264 CCDC85CA6NKD9 419 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 RLBP1P12271 317 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 SKOR1P84550 965 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 CENPCQ03188 943 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 NR5A1Q13285 461 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
TCN1-201ENST00000257264 TJAP1Q5JTD0 557 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
TCN1-201ENST00000257264 STAG1Q8WVM7 1258 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 ANAPC16Q96DE5 110 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 NT5C1AQ9BXI3 368 aa6.87□□□□□ -1.31
TCN1-201ENST00000257264 FHDC1Q9C0D6 1143 aaPredicted RBP6.87□□□□□ -1.31
TCN1-201ENST00000257264 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
TCN1-201ENST00000257264 G3BP2Q9UN86 482 aaKnown RBP6.87□□□□□ -1.31
TCN1-201ENST00000257264 CCDC194A0A1B0GVG4 234 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 TGFBR3LH3BV60 316 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 GYS2P54840 703 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 EXOC8Q8IYI6 725 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 MPNDQ8N594 471 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 CCDC113Q9H0I3 377 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 SUV39H2Q9H5I1 410 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 GTF2E1P29083 439 aaPredicted RBP6.86□□□□□ -1.31
TCN1-201ENST00000257264 TNNI3KQ59H18 835 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
TCN1-201ENST00000257264 ELP3Q9H9T3 547 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms