RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
VRTN-201ENST00000256362 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
VRTN-201ENST00000256362 A0A0D9SFI3 127 aa13.71□□□□□ -0.21
VRTN-201ENST00000256362 USP27XA6NNY8 438 aa13.71□□□□□ -0.21
VRTN-201ENST00000256362 ESCO1Q5FWF5 840 aa13.71□□□□□ -0.22
VRTN-201ENST00000256362 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.22
VRTN-201ENST00000256362 MNS1Q8NEH6 495 aa13.71□□□□□ -0.22
VRTN-201ENST00000256362 CACTINQ8WUQ7 758 aaKnown RBP13.71□□□□□ -0.22
VRTN-201ENST00000256362 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.22
VRTN-201ENST00000256362 KDRP35968 1356 aa13.71□□□□□ -0.22
VRTN-201ENST00000256362 HTATSF1O43719 755 aaKnown RBP13.7□□□□□ -0.22
VRTN-201ENST00000256362 G3BP1Q13283 466 aaKnown RBP eCLIP13.7□□□□□ -0.22
VRTN-201ENST00000256362 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 GPATCH3Q96I76 525 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 DNAJC2Q99543 621 aaKnown RBP13.7□□□□□ -0.22
VRTN-201ENST00000256362 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
VRTN-201ENST00000256362 BIN1O00499 593 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 PSME1Q06323 249 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 JAK2O60674 1132 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 ERCC6LQ2NKX8 1250 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 LARP1Q6PKG0 1096 aaKnown RBP13.7□□□□□ -0.22
VRTN-201ENST00000256362 CCDC34Q96HJ3 373 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 SUCLG2Q96I99 432 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
VRTN-201ENST00000256362 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 ZNF589Q86UQ0 364 aaPredicted RBP13.69□□□□□ -0.22
VRTN-201ENST00000256362 C10orf67Q8IYJ2 551 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 CCDC171Q6TFL3 1326 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 PDIA4P13667 645 aaKnown RBP13.69□□□□□ -0.22
VRTN-201ENST00000256362 HSP90AA4PQ58FG1 418 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
VRTN-201ENST00000256362 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
VRTN-201ENST00000256362 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 ADCY9O60503 1353 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 KIF18AQ8NI77 898 aa13.68□□□□□ -0.22
VRTN-201ENST00000256362 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 FBXO38Q6PIJ6 1188 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 TECPR2O15040 1411 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 SLC27A2O14975 620 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
VRTN-201ENST00000256362 SASH1O94885 1247 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
VRTN-201ENST00000256362 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
VRTN-201ENST00000256362 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 CALCOCO1Q9P1Z2 691 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 TERF2Q15554 542 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 CCDC144BQ3MJ40 725 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 CCDC144CPQ8IYA2 1237 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
VRTN-201ENST00000256362 AOX1Q06278 1338 aa13.67□□□□□ -0.22
VRTN-201ENST00000256362 NRDCO43847 1150 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 ZNF75DP51815 510 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
VRTN-201ENST00000256362 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 TEX35Q5T0J7 233 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
VRTN-201ENST00000256362 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
VRTN-201ENST00000256362 TTLL5Q6EMB2 1281 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 ANKRD7Q92527 254 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
VRTN-201ENST00000256362 CHST3Q7LGC8 479 aa13.65□□□□□ -0.22
VRTN-201ENST00000256362 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
VRTN-201ENST00000256362 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
VRTN-201ENST00000256362 NR1I2O75469 434 aa13.65□□□□□ -0.22
VRTN-201ENST00000256362 GYS2P54840 703 aa13.65□□□□□ -0.22
VRTN-201ENST00000256362 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
VRTN-201ENST00000256362 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
VRTN-201ENST00000256362 NECTIN1Q15223 517 aa13.65□□□□□ -0.22
VRTN-201ENST00000256362 DDX46Q7L014 1031 aaKnown RBP13.65□□□□□ -0.22
VRTN-201ENST00000256362 UBXN4Q92575 508 aa13.65□□□□□ -0.22
VRTN-201ENST00000256362 SLFN14P0C7P3 912 aa13.65□□□□□ -0.23
VRTN-201ENST00000256362 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.23
VRTN-201ENST00000256362 MYD88Q99836 296 aa13.65□□□□□ -0.23
VRTN-201ENST00000256362 EPC1Q9H2F5 836 aa13.65□□□□□ -0.23
VRTN-201ENST00000256362 GRM8O00222 908 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 ME1P48163 572 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 CCT2P78371 535 aaKnown RBP13.64□□□□□ -0.23
VRTN-201ENST00000256362 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
VRTN-201ENST00000256362 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms