RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
RPA1-201ENST00000254719 CWC27Q6UX04 472 aaKnown RBP11.09□□□□□ -0.63
RPA1-201ENST00000254719 PHF14O94880 888 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 HSP90AB4PQ58FF6 505 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 FGD1P98174 961 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 SYNE4Q8N205 404 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 NUCB2P80303 420 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 ISY1Q9ULR0 285 aaKnown RBP11.08□□□□□ -0.64
RPA1-201ENST00000254719 TACC3Q9Y6A5 838 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 GOLGA6L6A8MZA4 724 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 H7C1W4 665 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
RPA1-201ENST00000254719 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
RPA1-201ENST00000254719 CCDC8Q9H0W5 538 aaPredicted RBP11.07□□□□□ -0.64
RPA1-201ENST00000254719 FAM177BA6PVY3 158 aa11.07□□□□□ -0.64
RPA1-201ENST00000254719 NRDCO43847 1150 aa11.07□□□□□ -0.64
RPA1-201ENST00000254719 ADD1P35611 737 aaKnown RBP11.07□□□□□ -0.64
RPA1-201ENST00000254719 MYL6BP14649 208 aa11.07□□□□□ -0.64
RPA1-201ENST00000254719 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
RPA1-201ENST00000254719 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
RPA1-201ENST00000254719 FOXD4L5Q5VV16 416 aaPredicted RBP11.07□□□□□ -0.64
RPA1-201ENST00000254719 FOXD4L4Q8WXT5 416 aaPredicted RBP11.07□□□□□ -0.64
RPA1-201ENST00000254719 TSC1Q92574 1164 aa11.07□□□□□ -0.64
RPA1-201ENST00000254719 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
RPA1-201ENST00000254719 ESPNB1AK53 854 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 TAF5LO75529 589 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 CTDNEP1O95476 244 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 VPS53Q5VIR6 699 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 ATP6V1DQ9Y5K8 247 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 TRIM6-TRIM34B2RNG4 842 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 PRPF40AO75400 957 aaKnown RBP11.06□□□□□ -0.64
RPA1-201ENST00000254719 MRE11P49959 708 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 MAPK8IP2Q13387 824 aaPredicted RBP11.06□□□□□ -0.64
RPA1-201ENST00000254719 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
RPA1-201ENST00000254719 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 MTMR6Q9Y217 621 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 SYT1P21579 422 aa11.06□□□□□ -0.64
RPA1-201ENST00000254719 ZNF335Q9H4Z2 1342 aaPredicted RBP11.06□□□□□ -0.64
RPA1-201ENST00000254719 CLCN1P35523 988 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 ZNF831Q5JPB2 1677 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 CCDC171Q6TFL3 1326 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
RPA1-201ENST00000254719 CWC22Q9HCG8 908 aaKnown RBP11.05□□□□□ -0.64
RPA1-201ENST00000254719 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 SLC27A2O14975 620 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 A1BGP04217 495 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 TFCP2Q12800 502 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 ECHDC1Q9NTX5 307 aa11.05□□□□□ -0.64
RPA1-201ENST00000254719 TEFQ10587 303 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 SCARF1Q14162 830 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 CCDC129Q6ZRS4 1044 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 COL14A1Q05707 1796 aaKnown RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 TCEANC2Q96MN5 208 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 PUS3Q9BZE2 481 aaKnown RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 CACNA1SQ13698 1873 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 MCM2P49736 904 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
RPA1-201ENST00000254719 DCAF5Q96JK2 942 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
RPA1-201ENST00000254719 IGSF3O75054 1194 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 LARP1Q6PKG0 1096 aaKnown RBP11.03□□□□□ -0.64
RPA1-201ENST00000254719 R3HCC1Q9Y3T6 440 aaKnown RBP11.03□□□□□ -0.64
RPA1-201ENST00000254719 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 MYD88Q99836 296 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 ALDH8A1Q9H2A2 487 aaPredicted RBP11.03□□□□□ -0.64
RPA1-201ENST00000254719 CNPY2Q9Y2B0 182 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 LTBP4Q8N2S1 1624 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
RPA1-201ENST00000254719 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 DBNDD2Q9BQY9 259 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 SIL1Q9H173 461 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 TNNI3KQ59H18 835 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 FPGT-TNNI3KV9GXZ4 949 aa11.03□□□□□ -0.64
RPA1-201ENST00000254719 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.64
RPA1-201ENST00000254719 CYP21A2P08686 494 aa11.02□□□□□ -0.64
RPA1-201ENST00000254719 FAM173BQ6P4H8 233 aa11.02□□□□□ -0.64
RPA1-201ENST00000254719 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.65
RPA1-201ENST00000254719 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
RPA1-201ENST00000254719 NECAB1Q8N987 351 aa11.02□□□□□ -0.65
RPA1-201ENST00000254719 TM6SF1Q9BZW5 370 aa11.02□□□□□ -0.65
RPA1-201ENST00000254719 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.65
RPA1-201ENST00000254719 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
RPA1-201ENST00000254719 RBM8AQ9Y5S9 174 aaKnown RBP11.02□□□□□ -0.65
RPA1-201ENST00000254719 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
RPA1-201ENST00000254719 PRPF40BQ6NWY9 871 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms