RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.8
PTCD3-201ENST00000254630 ANXA1P04083 346 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 IL2RBP14784 551 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 PTPN14Q15678 1187 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 TAF3Q5VWG9 929 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 CKAP2LQ8IYA6 745 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 NIP7Q9Y221 180 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTCD3-201ENST00000254630 CETN1Q12798 172 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
PTCD3-201ENST00000254630 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 ZFYP08048 801 aaPredicted RBP10.02□□□□□ -0.81
PTCD3-201ENST00000254630 MAP9Q49MG5 647 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 BMP2KLQ5H9B9 411 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 RHPN1Q8TCX5 695 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 TNPO1Q92973 898 aaKnown RBP10.02□□□□□ -0.81
PTCD3-201ENST00000254630 PLCD4Q9BRC7 762 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 RTL9Q8NET4 1388 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 MAPKBP1O60336 1514 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 FBLN1P23142 703 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 CALRP27797 417 aaKnown RBP10.02□□□□□ -0.81
PTCD3-201ENST00000254630 SLC39A6Q13433 755 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.81
PTCD3-201ENST00000254630 CPLX3Q8WVH0 158 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 RMND1Q9NWS8 449 aa10.02□□□□□ -0.81
PTCD3-201ENST00000254630 TBCAO75347 108 aaKnown RBP10.01□□□□□ -0.81
PTCD3-201ENST00000254630 DDB1Q16531 1140 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 DZIP3Q86Y13 1208 aaKnown RBP10.01□□□□□ -0.81
PTCD3-201ENST00000254630 SIRT1Q96EB6 747 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 PCDH11XQ9BZA7 1347 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 PCDH11YQ9BZA8 1340 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 TNNT1P13805 278 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 ATP2B3Q16720 1220 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 TMC6Q7Z403 805 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 ERMNQ8TAM6 284 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 FLT4P35916 1363 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 KLF18A0A0U1RQI7 1052 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 ALDH1L1O75891 902 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 NAA16Q6N069 864 aaPredicted RBP10.01□□□□□ -0.81
PTCD3-201ENST00000254630 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
PTCD3-201ENST00000254630 GRM8O00222 908 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 PRC1O43663 620 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 IGHDP01880 384 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 MCMDC2Q4G0Z9 681 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 ARHGAP45Q92619 1136 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 MMRN2Q9H8L6 949 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 RTN1Q16799 776 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 DYDC1Q8WWB3 177 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 LRRC59Q96AG4 307 aaKnown RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 RBM17Q96I25 401 aaKnown RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 MYZAPP0CAP1 466 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 DNA2P51530 1060 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 KSR2Q6VAB6 950 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 BIN1O00499 593 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 PPM1FP49593 454 aaPredicted RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 KDM5AP29375 1690 aaKnown RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 CTNNA2P26232 953 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 KIF4BQ2VIQ3 1234 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 TCERG1LQ5VWI1 586 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 UBXN4Q92575 508 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 ESR2Q92731 530 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 NLRP3Q96P20 1036 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 CRACR2AQ9BSW2 395 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 ZSCAN16Q9H4T2 348 aaPredicted RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 PUF60Q9UHX1 559 aaKnown RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 ZBTB43O43298 467 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 STAT6P42226 847 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
PTCD3-201ENST00000254630 PAG1Q9NWQ8 432 aa10□□□□□ -0.81
PTCD3-201ENST00000254630 USP8P40818 1118 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 MAP2K1Q02750 393 aaPredicted RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 TRMT1LQ7Z2T5 733 aaKnown RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 GSDMDP57764 484 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 IFFO1Q0D2I5 559 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 MTHFSDQ2M296 383 aaKnown RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 Q6ZUG5 572 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 IL15P40933 162 aaPredicted RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 MEIS3Q99687 375 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 TMCO3Q6UWJ1 677 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 TBC1D5Q92609 795 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 ALG1Q9BT22 464 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 ISM2Q6H9L7 571 aa9.99□□□□□ -0.81
PTCD3-201ENST00000254630 RTCBQ9Y3I0 505 aaKnown RBP9.99□□□□□ -0.81
PTCD3-201ENST00000254630 ATP7AQ04656 1500 aa9.98□□□□□ -0.81
PTCD3-201ENST00000254630 ATP8B2P98198 1209 aa9.98□□□□□ -0.81
PTCD3-201ENST00000254630 NMIQ13287 307 aaPredicted RBP9.98□□□□□ -0.81
PTCD3-201ENST00000254630 IDEP14735 1019 aa9.98□□□□□ -0.81
PTCD3-201ENST00000254630 GNAT2P19087 354 aa9.98□□□□□ -0.81
PTCD3-201ENST00000254630 TMTC2Q8N394 836 aa9.98□□□□□ -0.81
PTCD3-201ENST00000254630 CABLES1Q8TDN4 633 aa9.98□□□□□ -0.81
PTCD3-201ENST00000254630 IQSEC3Q9UPP2 1182 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms