RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 AFDNP55196 1824 aaKnown RBP22.54■■□□□ 1.2
PDLIM4-201ENST00000253754 BRD1O95696 1058 aa22.54■■□□□ 1.2
PDLIM4-201ENST00000253754 RABL6Q3YEC7 729 aaPredicted RBP22.54■■□□□ 1.2
PDLIM4-201ENST00000253754 SLC4A9Q96Q91 983 aa22.54■■□□□ 1.2
PDLIM4-201ENST00000253754 CASTP20810 708 aaKnown RBP22.54■■□□□ 1.2
PDLIM4-201ENST00000253754 ZNF330Q9Y3S2 320 aaPredicted RBP22.54■■□□□ 1.2
PDLIM4-201ENST00000253754 STARD3NLO95772 234 aa22.53■■□□□ 1.2
PDLIM4-201ENST00000253754 RUFY3Q7L099 469 aa22.53■■□□□ 1.2
PDLIM4-201ENST00000253754 FSD1Q9BTV5 496 aa22.53■■□□□ 1.2
PDLIM4-201ENST00000253754 QTRT2Q9H974 415 aaKnown RBP22.53■■□□□ 1.2
PDLIM4-201ENST00000253754 DBNLQ9UJU6 430 aaKnown RBP22.53■■□□□ 1.2
PDLIM4-201ENST00000253754 NDUFB9Q9Y6M9 179 aa22.53■■□□□ 1.2
PDLIM4-201ENST00000253754 A0A0D9SFI3 127 aa22.52■■□□□ 1.2
PDLIM4-201ENST00000253754 ZBTB3Q9H5J0 574 aa22.52■■□□□ 1.2
PDLIM4-201ENST00000253754 CCDC171Q6TFL3 1326 aa22.52■■□□□ 1.2
PDLIM4-201ENST00000253754 CAVIN1Q6NZI2 390 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-201ENST00000253754 LMBR1LQ6UX01 489 aa22.52■■□□□ 1.2
PDLIM4-201ENST00000253754 TNNI3KQ59H18 835 aa22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 FPGT-TNNI3KV9GXZ4 949 aa22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 KCNQ2O43526 872 aa22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 FOXD4L6Q3SYB3 417 aaPredicted RBP22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 FOXD4L3Q6VB84 417 aaPredicted RBP22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 GPT2Q8TD30 523 aa22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 JAKMIP1Q96N16 626 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 CHMP3Q9Y3E7 222 aa22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-201ENST00000253754 DTNBO60941 627 aa22.5■■□□□ 1.19
PDLIM4-201ENST00000253754 LARGE1O95461 756 aa22.5■■□□□ 1.19
PDLIM4-201ENST00000253754 COL9A3Q14050 684 aaPredicted RBP22.5■■□□□ 1.19
PDLIM4-201ENST00000253754 RBM8AQ9Y5S9 174 aaKnown RBP22.5■■□□□ 1.19
PDLIM4-201ENST00000253754 FOXO4P98177 505 aa22.49■■□□□ 1.19
PDLIM4-201ENST00000253754 NECTIN1Q15223 517 aa22.49■■□□□ 1.19
PDLIM4-201ENST00000253754 CHGBP05060 677 aa22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 RBM27Q9P2N5 1060 aaKnown RBP22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 ISY1Q9ULR0 285 aaKnown RBP22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 COL15A1P39059 1388 aa22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 H7C1W4 665 aa22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 ZNF589Q86UQ0 364 aaPredicted RBP22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 DBNDD2Q9BQY9 259 aa22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 NSFL1CQ9UNZ2 370 aaKnown RBP22.48■■□□□ 1.19
PDLIM4-201ENST00000253754 TRPC5Q9UL62 973 aaPredicted RBP22.47■■□□□ 1.19
PDLIM4-201ENST00000253754 LIMCH1Q9UPQ0 1083 aa22.47■■□□□ 1.19
PDLIM4-201ENST00000253754 RPAP1Q9BWH6 1393 aaPredicted RBP22.47■■□□□ 1.19
PDLIM4-201ENST00000253754 KCNJ4P48050 445 aa22.47■■□□□ 1.19
PDLIM4-201ENST00000253754 CREB3L3Q68CJ9 461 aa22.47■■□□□ 1.19
PDLIM4-201ENST00000253754 CWC25Q9NXE8 425 aaPredicted RBP22.47■■□□□ 1.19
PDLIM4-201ENST00000253754 HIP1O00291 1037 aa22.46■■□□□ 1.19
PDLIM4-201ENST00000253754 MAP4K1Q92918 833 aa22.46■■□□□ 1.19
PDLIM4-201ENST00000253754 KCNB2Q92953 911 aa22.46■■□□□ 1.19
PDLIM4-201ENST00000253754 PDRG1Q9NUG6 133 aa22.46■■□□□ 1.19
PDLIM4-201ENST00000253754 TAF6LQ9Y6J9 622 aa22.46■■□□□ 1.19
PDLIM4-201ENST00000253754 ZSCAN23Q3MJ62 389 aa22.46■■□□□ 1.19
PDLIM4-201ENST00000253754 ATP5JP18859 108 aa22.45■■□□□ 1.18
PDLIM4-201ENST00000253754 DNAJC2Q99543 621 aaKnown RBP22.45■■□□□ 1.18
PDLIM4-201ENST00000253754 ZSWIM6Q9HCJ5 1215 aa22.45■■□□□ 1.18
PDLIM4-201ENST00000253754 MED23Q9ULK4 1368 aa22.45■■□□□ 1.18
PDLIM4-201ENST00000253754 SLC27A2O14975 620 aa22.44■■□□□ 1.18
PDLIM4-201ENST00000253754 ATP6V1AP38606 617 aa22.44■■□□□ 1.18
PDLIM4-201ENST00000253754 SNRKQ9NRH2 765 aa22.44■■□□□ 1.18
PDLIM4-201ENST00000253754 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
PDLIM4-201ENST00000253754 NUP188Q5SRE5 1749 aa22.44■■□□□ 1.18
PDLIM4-201ENST00000253754 LOC102724428A0A0B4J2F2 783 aa22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 SIK1P57059 783 aa22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 CYP46A1Q9Y6A2 500 aa22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 VPS53Q5VIR6 699 aa22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 ATG9AQ7Z3C6 839 aa22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 ZNF594Q96JF6 807 aaPredicted RBP22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 GDPD2Q9HCC8 539 aa22.43■■□□□ 1.18
PDLIM4-201ENST00000253754 ATRNO75882 1429 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 CCDC83Q8IWF9 413 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 TJP1Q07157 1748 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 PALLDQ8WX93 1383 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 FAM43AQ8N2R8 423 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 TM6SF1Q9BZW5 370 aa22.42■■□□□ 1.18
PDLIM4-201ENST00000253754 THSD7AQ9UPZ6 1657 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 TCEANC2Q96MN5 208 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 RGS17Q9UGC6 210 aaPredicted RBP22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 WDR33Q9C0J8 1336 aaKnown RBP22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 ZNF445P59923 1031 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 ST3GAL1Q11201 340 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 PTF1AQ7RTS3 328 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 ILDR1Q86SU0 546 aaPredicted RBP22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 SEPT12Q8IYM1 358 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 RRAGDQ9NQL2 400 aaPredicted RBP22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 TMEM63CQ9P1W3 806 aa22.41■■□□□ 1.18
PDLIM4-201ENST00000253754 LRRC24Q50LG9 513 aa22.4■■□□□ 1.18
PDLIM4-201ENST00000253754 CCDC129Q6ZRS4 1044 aa22.4■■□□□ 1.18
PDLIM4-201ENST00000253754 CCDC191Q8NCU4 936 aa22.4■■□□□ 1.18
PDLIM4-201ENST00000253754 NEUROD6Q96NK8 337 aa22.4■■□□□ 1.18
PDLIM4-201ENST00000253754 SEC62Q99442 399 aaKnown RBP22.4■■□□□ 1.18
PDLIM4-201ENST00000253754 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
PDLIM4-201ENST00000253754 TAF5LO75529 589 aa22.39■■□□□ 1.17
PDLIM4-201ENST00000253754 TIMM10P62072 90 aa22.39■■□□□ 1.17
PDLIM4-201ENST00000253754 ME3Q16798 604 aa22.39■■□□□ 1.17
PDLIM4-201ENST00000253754 NECAB1Q8N987 351 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms