RNA–Protein interactions for RNA: ENST00000253099.10

MRPL4-201, Transcript of mitochondrial ribosomal protein L4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MRPL4, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-201ENST00000253099 PDZRN3Q9UPQ7 1066 aa31.37■■■□□ 2.61
MRPL4-201ENST00000253099 LRRFIP2Q9Y608 721 aaKnown RBP31.37■■■□□ 2.61
MRPL4-201ENST00000253099 MYH3P11055 1940 aa31.37■■■□□ 2.61
MRPL4-201ENST00000253099 COL11A2P13942 1736 aaPredicted RBP31.36■■■□□ 2.61
MRPL4-201ENST00000253099 CCDC85AQ96PX6 553 aaPredicted RBP31.36■■■□□ 2.61
MRPL4-201ENST00000253099 CRBNQ96SW2 442 aa31.36■■■□□ 2.61
MRPL4-201ENST00000253099 KCNA3P22001 575 aa31.35■■■□□ 2.61
MRPL4-201ENST00000253099 HDAC5Q9UQL6 1122 aa31.35■■■□□ 2.61
MRPL4-201ENST00000253099 GNAI2P04899 355 aa31.34■■■□□ 2.61
MRPL4-201ENST00000253099 CSF1RP07333 972 aa31.34■■■□□ 2.61
MRPL4-201ENST00000253099 CCDC152Q4G0S7 254 aa31.34■■■□□ 2.61
MRPL4-201ENST00000253099 LMBR1LQ6UX01 489 aa31.34■■■□□ 2.61
MRPL4-201ENST00000253099 RPGRQ92834 1020 aaKnown RBP31.34■■■□□ 2.61
MRPL4-201ENST00000253099 NPR1P16066 1061 aa31.33■■■□□ 2.61
MRPL4-201ENST00000253099 ANKRD44Q8N8A2 993 aa31.33■■■□□ 2.61
MRPL4-201ENST00000253099 MASTLQ96GX5 879 aa31.33■■■□□ 2.61
MRPL4-201ENST00000253099 ZBTB40Q9NUA8 1239 aa31.33■■■□□ 2.61
MRPL4-201ENST00000253099 IRX6P78412 446 aaPredicted RBP31.33■■■□□ 2.61
MRPL4-201ENST00000253099 ZNF622Q969S3 477 aaKnown RBP eCLIP31.33■■■□□ 2.61
MRPL4-201ENST00000253099 C1orf115Q9H7X2 142 aa31.33■■■□□ 2.61
MRPL4-201ENST00000253099 HOXA10P31260 410 aaPredicted RBP31.32■■■□□ 2.6
MRPL4-201ENST00000253099 RABL6Q3YEC7 729 aaPredicted RBP31.32■■■□□ 2.6
MRPL4-201ENST00000253099 CHMP4BQ9H444 224 aaKnown RBP31.32■■■□□ 2.6
MRPL4-201ENST00000253099 GREM2Q9H772 168 aa31.32■■■□□ 2.6
MRPL4-201ENST00000253099 STYK1Q6J9G0 422 aa31.31■■■□□ 2.6
MRPL4-201ENST00000253099 FAM161AQ3B820 660 aa31.3■■■□□ 2.6
MRPL4-201ENST00000253099 DDX46Q7L014 1031 aaKnown RBP31.3■■■□□ 2.6
MRPL4-201ENST00000253099 RBM17Q96I25 401 aaKnown RBP31.3■■■□□ 2.6
MRPL4-201ENST00000253099 SEC31BQ9NQW1 1179 aa31.3■■■□□ 2.6
MRPL4-201ENST00000253099 CHMP3Q9Y3E7 222 aa31.3■■■□□ 2.6
MRPL4-201ENST00000253099 DLEC1Q9Y238 1755 aa31.29■■■□□ 2.6
MRPL4-201ENST00000253099 RTL9Q8NET4 1388 aa31.28■■■□□ 2.6
MRPL4-201ENST00000253099 CRAMP1Q96RY5 1269 aa31.27■■■□□ 2.6
MRPL4-201ENST00000253099 PIM2Q9P1W9 311 aa31.27■■■□□ 2.6
MRPL4-201ENST00000253099 WWC3Q9ULE0 1092 aa31.27■■■□□ 2.6
MRPL4-201ENST00000253099 TAF1P21675 1872 aa31.27■■■□□ 2.6
MRPL4-201ENST00000253099 ITGA6P23229 1130 aa31.27■■■□□ 2.6
MRPL4-201ENST00000253099 ALDH1B1P30837 517 aa31.26■■■□□ 2.59
MRPL4-201ENST00000253099 CNKSR1Q969H4 720 aa31.26■■■□□ 2.59
MRPL4-201ENST00000253099 TTLL6Q8N841 843 aa31.25■■■□□ 2.59
MRPL4-201ENST00000253099 EXOC6Q8TAG9 804 aa31.25■■■□□ 2.59
MRPL4-201ENST00000253099 BRCA1P38398 1863 aaKnown RBP31.24■■■□□ 2.59
MRPL4-201ENST00000253099 COL4A1P02462 1669 aa31.24■■■□□ 2.59
MRPL4-201ENST00000253099 IFIT5Q13325 482 aaKnown RBP31.24■■■□□ 2.59
MRPL4-201ENST00000253099 CELF1Q92879 486 aaKnown RBP31.24■■■□□ 2.59
MRPL4-201ENST00000253099 GRAPQ13588 217 aa31.23■■■□□ 2.59
MRPL4-201ENST00000253099 CCDC57Q2TAC2 916 aa31.23■■■□□ 2.59
MRPL4-201ENST00000253099 GRAPLQ8TC17 118 aaPredicted RBP31.23■■■□□ 2.59
MRPL4-201ENST00000253099 ANKRD18BA2A2Z9 1011 aa31.22■■■□□ 2.59
MRPL4-201ENST00000253099 MTX1Q13505 466 aa31.22■■■□□ 2.59
MRPL4-201ENST00000253099 PRPF40BQ6NWY9 871 aaKnown RBP31.22■■■□□ 2.59
MRPL4-201ENST00000253099 DALRD3Q5D0E6 543 aaKnown RBP31.21■■■□□ 2.59
MRPL4-201ENST00000253099 CDC5LQ99459 802 aaKnown RBP31.21■■■□□ 2.59
MRPL4-201ENST00000253099 SLX4Q8IY92 1834 aa31.21■■■□□ 2.59
MRPL4-201ENST00000253099 CACNA1SQ13698 1873 aa31.21■■■□□ 2.59
MRPL4-201ENST00000253099 RPS8P62241 208 aaKnown RBP31.21■■■□□ 2.59
MRPL4-201ENST00000253099 SRGAP3O43295 1099 aa31.2■■■□□ 2.58
MRPL4-201ENST00000253099 CEP85Q6P2H3 762 aa31.2■■■□□ 2.58
MRPL4-201ENST00000253099 PNMA6EA0A0J9YXQ4 647 aa31.19■■■□□ 2.58
MRPL4-201ENST00000253099 BBOX1O75936 387 aa31.19■■■□□ 2.58
MRPL4-201ENST00000253099 ATP8B2P98198 1209 aa31.19■■■□□ 2.58
MRPL4-201ENST00000253099 ANKRD18AQ8IVF6 992 aa31.19■■■□□ 2.58
MRPL4-201ENST00000253099 ZNF594Q96JF6 807 aaPredicted RBP31.19■■■□□ 2.58
MRPL4-201ENST00000253099 BCS1LQ9Y276 419 aa31.18■■■□□ 2.58
MRPL4-201ENST00000253099 PPEF1O14829 653 aaPredicted RBP31.17■■■□□ 2.58
MRPL4-201ENST00000253099 RFX5P48382 616 aaPredicted RBP31.17■■■□□ 2.58
MRPL4-201ENST00000253099 TAF7LQ5H9L4 462 aa31.16■■■□□ 2.58
MRPL4-201ENST00000253099 SLC51AQ86UW1 340 aa31.16■■■□□ 2.58
MRPL4-201ENST00000253099 KLHDC4Q8TBB5 520 aa31.16■■■□□ 2.58
MRPL4-201ENST00000253099 ZNF219Q9P2Y4 722 aaPredicted RBP31.16■■■□□ 2.58
MRPL4-201ENST00000253099 IGHMBP2P38935 993 aaKnown RBP31.15■■■□□ 2.58
MRPL4-201ENST00000253099 C7orf43Q8WVR3 580 aa31.15■■■□□ 2.58
MRPL4-201ENST00000253099 UTRNP46939 3433 aa31.15■■■□□ 2.58
MRPL4-201ENST00000253099 SIRT2Q8IXJ6 389 aa31.14■■■□□ 2.58
MRPL4-201ENST00000253099 RPAP2Q8IXW5 612 aaPredicted RBP31.14■■■□□ 2.58
MRPL4-201ENST00000253099 PTPN12Q05209 780 aaKnown RBP31.14■■■□□ 2.57
MRPL4-201ENST00000253099 AAMPQ13685 434 aa31.14■■■□□ 2.57
MRPL4-201ENST00000253099 POLA2Q14181 598 aa31.14■■■□□ 2.57
MRPL4-201ENST00000253099 OLFM4Q6UX06 510 aa31.14■■■□□ 2.57
MRPL4-201ENST00000253099 SSH3Q8TE77 659 aa31.14■■■□□ 2.57
MRPL4-201ENST00000253099 MPHOSPH8Q99549 860 aa31.14■■■□□ 2.57
MRPL4-201ENST00000253099 PCDHB15Q9Y5E8 787 aa31.14■■■□□ 2.57
MRPL4-201ENST00000253099 SPEF2Q9C093 1822 aa31.13■■■□□ 2.57
MRPL4-201ENST00000253099 C21orf2O43822 256 aa31.13■■■□□ 2.57
MRPL4-201ENST00000253099 BSDC1Q9NW68 430 aaPredicted RBP31.13■■■□□ 2.57
MRPL4-201ENST00000253099 ATP6V0A2Q9Y487 856 aa31.13■■■□□ 2.57
MRPL4-201ENST00000253099 TMC4Q7Z404 712 aa31.12■■■□□ 2.57
MRPL4-201ENST00000253099 PELP1Q8IZL8 1130 aaKnown RBP31.12■■■□□ 2.57
MRPL4-201ENST00000253099 PA2G4Q9UQ80 394 aaKnown RBP31.12■■■□□ 2.57
MRPL4-201ENST00000253099 LDHAL6AQ6ZMR3 332 aa31.11■■■□□ 2.57
MRPL4-201ENST00000253099 SP8Q8IXZ3 490 aa31.11■■■□□ 2.57
MRPL4-201ENST00000253099 YBX3P16989 372 aaKnown RBP eCLIP31.1■■■□□ 2.572e-7■■□□□ 13
MRPL4-201ENST00000253099 PUS3Q9BZE2 481 aaKnown RBP31.1■■■□□ 2.57
MRPL4-201ENST00000253099 COPRSQ9NQ92 184 aa31.1■■■□□ 2.57
MRPL4-201ENST00000253099 NEFLP07196 543 aa31.09■■■□□ 2.57
MRPL4-201ENST00000253099 SIL1Q9H173 461 aa31.08■■■□□ 2.57
MRPL4-201ENST00000253099 CNNM1Q9NRU3 951 aa31.08■■■□□ 2.57
MRPL4-201ENST00000253099 ARFGEF1Q9Y6D6 1849 aa31.08■■■□□ 2.57
MRPL4-201ENST00000253099 LRRC24Q50LG9 513 aa31.08■■■□□ 2.57
MRPL4-201ENST00000253099 MINPP1Q9UNW1 487 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms