RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 MRC1P22897 1456 aa22.51■■□□□ 1.19
SNX4-201ENST00000251775 TPM3P06753 285 aa22.51■■□□□ 1.19
SNX4-201ENST00000251775 SPC24Q8NBT2 197 aa22.51■■□□□ 1.19
SNX4-201ENST00000251775 DCCP43146 1447 aa22.51■■□□□ 1.19
SNX4-201ENST00000251775 DCAF5Q96JK2 942 aa22.51■■□□□ 1.19
SNX4-201ENST00000251775 PKD1L3Q7Z443 1732 aa22.51■■□□□ 1.19
SNX4-201ENST00000251775 CTIFO43310 598 aaKnown RBP22.5■■□□□ 1.19
SNX4-201ENST00000251775 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
SNX4-201ENST00000251775 DNM1Q05193 864 aaKnown RBP22.5■■□□□ 1.19
SNX4-201ENST00000251775 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
SNX4-201ENST00000251775 TNS3Q68CZ2 1445 aa22.5■■□□□ 1.19
SNX4-201ENST00000251775 SPDYE4A6NLX3 237 aa22.5■■□□□ 1.19
SNX4-201ENST00000251775 ANKRD13DQ6ZTN6 518 aa22.5■■□□□ 1.19
SNX4-201ENST00000251775 AFDNP55196 1824 aaKnown RBP22.49■■□□□ 1.19
SNX4-201ENST00000251775 CASTP20810 708 aaKnown RBP22.49■■□□□ 1.19
SNX4-201ENST00000251775 PRPF40BQ6NWY9 871 aaKnown RBP22.49■■□□□ 1.19
SNX4-201ENST00000251775 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
SNX4-201ENST00000251775 LARGE1O95461 756 aa22.49■■□□□ 1.19
SNX4-201ENST00000251775 ADCK5Q3MIX3 580 aa22.49■■□□□ 1.19
SNX4-201ENST00000251775 FAM227BQ96M60 508 aa22.48■■□□□ 1.19
SNX4-201ENST00000251775 MTMR6Q9Y217 621 aa22.48■■□□□ 1.19
SNX4-201ENST00000251775 KCNB2Q92953 911 aa22.48■■□□□ 1.19
SNX4-201ENST00000251775 U2AF2P26368 475 aaKnown RBP eCLIP22.47■■□□□ 1.19
SNX4-201ENST00000251775 NMIQ13287 307 aaPredicted RBP22.47■■□□□ 1.19
SNX4-201ENST00000251775 BOLA2Q9H3K6 86 aa22.47■■□□□ 1.19
SNX4-201ENST00000251775 CCDC171Q6TFL3 1326 aa22.47■■□□□ 1.19
SNX4-201ENST00000251775 NECTIN1Q15223 517 aa22.47■■□□□ 1.19
SNX4-201ENST00000251775 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
SNX4-201ENST00000251775 SPATA31A3Q5VYP0 1347 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 ARFGEF2Q9Y6D5 1785 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 GOLGA6L6A8MZA4 724 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 DTNBO60941 627 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 KIF20AO95235 890 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 GJB2P29033 226 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 CADPS2Q86UW7 1296 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 JAKMIP1Q96N16 626 aaKnown RBP22.46■■□□□ 1.19
SNX4-201ENST00000251775 CCDC192P0DO97 292 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 PODXL2Q9NZ53 605 aa22.46■■□□□ 1.19
SNX4-201ENST00000251775 CCDC83Q8IWF9 413 aa22.45■■□□□ 1.18
SNX4-201ENST00000251775 GLI3P10071 1580 aa22.45■■□□□ 1.18
SNX4-201ENST00000251775 CABP4P57796 275 aa22.45■■□□□ 1.18
SNX4-201ENST00000251775 ZSWIM6Q9HCJ5 1215 aa22.45■■□□□ 1.18
SNX4-201ENST00000251775 PTGS1P23219 599 aa22.44■■□□□ 1.18
SNX4-201ENST00000251775 RFX5P48382 616 aaPredicted RBP22.44■■□□□ 1.18
SNX4-201ENST00000251775 TM6SF1Q9BZW5 370 aa22.44■■□□□ 1.18
SNX4-201ENST00000251775 RBM8AQ9Y5S9 174 aaKnown RBP22.44■■□□□ 1.18
SNX4-201ENST00000251775 PLEKHG2Q9H7P9 1386 aa22.44■■□□□ 1.18
SNX4-201ENST00000251775 DDX54Q8TDD1 881 aaKnown RBP22.43■■□□□ 1.18
SNX4-201ENST00000251775 PDRG1Q9NUG6 133 aa22.43■■□□□ 1.18
SNX4-201ENST00000251775 VPS53Q5VIR6 699 aa22.43■■□□□ 1.18
SNX4-201ENST00000251775 FAM200AQ8TCP9 573 aa22.43■■□□□ 1.18
SNX4-201ENST00000251775 MAP4K1Q92918 833 aa22.43■■□□□ 1.18
SNX4-201ENST00000251775 COPRSQ9NQ92 184 aa22.43■■□□□ 1.18
SNX4-201ENST00000251775 A0A0D9SFI3 127 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 ATP5J2-PTCD1G3V325 749 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 HIP1O00291 1037 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 PTCD1O75127 700 aaKnown RBP22.42■■□□□ 1.18
SNX4-201ENST00000251775 UBE3BQ7Z3V4 1068 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 SNRKQ9NRH2 765 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 CPDO75976 1380 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 LAMB4A4D0S4 1761 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 CREB3L3Q68CJ9 461 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 FSD1Q9BTV5 496 aa22.42■■□□□ 1.18
SNX4-201ENST00000251775 PTPN12Q05209 780 aaKnown RBP22.41■■□□□ 1.18
SNX4-201ENST00000251775 CYP46A1Q9Y6A2 500 aa22.41■■□□□ 1.18
SNX4-201ENST00000251775 ST3GAL1Q11201 340 aa22.41■■□□□ 1.18
SNX4-201ENST00000251775 NCBP1Q09161 790 aaKnown RBP22.4■■□□□ 1.18
SNX4-201ENST00000251775 RABL6Q3YEC7 729 aaPredicted RBP22.4■■□□□ 1.18
SNX4-201ENST00000251775 MRVI1Q9Y6F6 885 aa22.4■■□□□ 1.18
SNX4-201ENST00000251775 PARP4Q9UKK3 1724 aaKnown RBP22.4■■□□□ 1.18
SNX4-201ENST00000251775 COL9A3Q14050 684 aaPredicted RBP22.4■■□□□ 1.18
SNX4-201ENST00000251775 EDC3Q96F86 508 aaKnown RBP22.4■■□□□ 1.18
SNX4-201ENST00000251775 VPS37CA5D8V6 355 aaPredicted RBP22.39■■□□□ 1.18
SNX4-201ENST00000251775 ZKSCAN1P17029 563 aaPredicted RBP22.39■■□□□ 1.18
SNX4-201ENST00000251775 TTC6Q86TZ1 520 aa22.39■■□□□ 1.18
SNX4-201ENST00000251775 A0A087WZG4 1122 aa22.39■■□□□ 1.17
SNX4-201ENST00000251775 KCNJ4P48050 445 aa22.39■■□□□ 1.17
SNX4-201ENST00000251775 TFCP2Q12800 502 aa22.39■■□□□ 1.17
SNX4-201ENST00000251775 LUZP1Q86V48 1076 aa22.39■■□□□ 1.17
SNX4-201ENST00000251775 DBNLQ9UJU6 430 aaKnown RBP22.39■■□□□ 1.17
SNX4-201ENST00000251775 XIRP1Q702N8 1843 aaKnown RBP22.39■■□□□ 1.17
SNX4-201ENST00000251775 MED23Q9ULK4 1368 aa22.39■■□□□ 1.17
SNX4-201ENST00000251775 SLC27A2O14975 620 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 CASP7P55210 303 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 TYRO3Q06418 890 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 MAP3K11Q16584 847 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 TNNI3KQ59H18 835 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 PLBD2Q8NHP8 589 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 FEZ1Q99689 392 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 FPGT-TNNI3KV9GXZ4 949 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 COL15A1P39059 1388 aa22.38■■□□□ 1.17
SNX4-201ENST00000251775 NBPF26B4DH59 902 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 LIG1P18858 919 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 LRMPQ12912 555 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 NBPF14Q5TI25 921 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 NBPF10Q6P3W6 841 aaKnown RBP22.37■■□□□ 1.17
SNX4-201ENST00000251775 CCDC186Q7Z3E2 898 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 NBPF15Q8N660 670 aa22.37■■□□□ 1.17
SNX4-201ENST00000251775 ZSCAN31Q96LW9 406 aaPredicted RBP22.37■■□□□ 1.17
SNX4-201ENST00000251775 NUP62CLQ9H1M0 184 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 403.5 ms