RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 GIGYF2Q6Y7W6 1299 aaKnown RBP17.74■□□□□ 0.43
MBD4-201ENST00000249910 JAKMIP1Q96N16 626 aaKnown RBP17.74■□□□□ 0.43
MBD4-201ENST00000249910 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
MBD4-201ENST00000249910 EYA2O00167 538 aa17.74■□□□□ 0.43
MBD4-201ENST00000249910 MAP3K15Q6ZN16 1313 aa17.74■□□□□ 0.43
MBD4-201ENST00000249910 PAPPAQ13219 1627 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 FGD1P98174 961 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 CUL4AQ13619 759 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
MBD4-201ENST00000249910 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
MBD4-201ENST00000249910 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
MBD4-201ENST00000249910 MAP4K1Q92918 833 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 TTC14Q96N46 770 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
MBD4-201ENST00000249910 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
MBD4-201ENST00000249910 A0A1B0GUL7 405 aa17.72■□□□□ 0.43
MBD4-201ENST00000249910 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
MBD4-201ENST00000249910 TCEANC2Q96MN5 208 aa17.72■□□□□ 0.43
MBD4-201ENST00000249910 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
MBD4-201ENST00000249910 HIP1O00291 1037 aa17.72■□□□□ 0.43
MBD4-201ENST00000249910 GOLIM4O00461 696 aa17.72■□□□□ 0.43
MBD4-201ENST00000249910 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
MBD4-201ENST00000249910 CREB3L3Q68CJ9 461 aa17.72■□□□□ 0.43
MBD4-201ENST00000249910 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
MBD4-201ENST00000249910 FAM177BA6PVY3 158 aa17.71■□□□□ 0.43
MBD4-201ENST00000249910 HAUS7Q99871 368 aa17.71■□□□□ 0.43
MBD4-201ENST00000249910 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
MBD4-201ENST00000249910 KCNQ2O43526 872 aa17.71■□□□□ 0.42
MBD4-201ENST00000249910 LARGE1O95461 756 aa17.71■□□□□ 0.42
MBD4-201ENST00000249910 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.42
MBD4-201ENST00000249910 EP400Q96L91 3159 aa17.7■□□□□ 0.42
MBD4-201ENST00000249910 PDIA4P13667 645 aaKnown RBP17.7■□□□□ 0.42
MBD4-201ENST00000249910 ZKSCAN1P17029 563 aaPredicted RBP17.7■□□□□ 0.42
MBD4-201ENST00000249910 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
MBD4-201ENST00000249910 SLC27A2O14975 620 aa17.7■□□□□ 0.42
MBD4-201ENST00000249910 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
MBD4-201ENST00000249910 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
MBD4-201ENST00000249910 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
MBD4-201ENST00000249910 GREM2Q9H772 168 aa17.7■□□□□ 0.42
MBD4-201ENST00000249910 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
MBD4-201ENST00000249910 NUP188Q5SRE5 1749 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 ITGB4P16144 1822 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
MBD4-201ENST00000249910 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 TAF5LO75529 589 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 IFIT5Q13325 482 aaKnown RBP17.69■□□□□ 0.42
MBD4-201ENST00000249910 CEP126Q9P2H0 1117 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 GOLGA6L22H0YM25 854 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 ADORA1P30542 326 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
MBD4-201ENST00000249910 KCNQ4P56696 695 aa17.68■□□□□ 0.42
MBD4-201ENST00000249910 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
MBD4-201ENST00000249910 PDRG1Q9NUG6 133 aa17.68■□□□□ 0.42
MBD4-201ENST00000249910 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
MBD4-201ENST00000249910 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
MBD4-201ENST00000249910 PRPF40AO75400 957 aaKnown RBP17.67■□□□□ 0.42
MBD4-201ENST00000249910 ITGA6P23229 1130 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
MBD4-201ENST00000249910 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
MBD4-201ENST00000249910 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 ZSWIM6Q9HCJ5 1215 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 CYP46A1Q9Y6A2 500 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 MED23Q9ULK4 1368 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 TJP1Q07157 1748 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
MBD4-201ENST00000249910 CSF1RP07333 972 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 SPATA31A5Q5VU36 1347 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 SPATA31A7Q8IWB4 1347 aa17.67■□□□□ 0.42
MBD4-201ENST00000249910 TOM1O60784 492 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
MBD4-201ENST00000249910 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 C8orf37Q96NL8 207 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 ZNF609O15014 1411 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 LOC102724428A0A0B4J2F2 783 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 CIAO1O76071 339 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 NCLP19338 710 aaKnown RBP17.66■□□□□ 0.42
MBD4-201ENST00000249910 SIK1P57059 783 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 ITPK1Q13572 414 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 INTS5Q6P9B9 1019 aaKnown RBP17.66■□□□□ 0.42
MBD4-201ENST00000249910 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 KCNB2Q92953 911 aa17.66■□□□□ 0.42
MBD4-201ENST00000249910 BRD1O95696 1058 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 IL6STP40189 918 aaPredicted RBP17.65■□□□□ 0.42
MBD4-201ENST00000249910 CRKLP46109 303 aaKnown RBP17.65■□□□□ 0.42
MBD4-201ENST00000249910 GORABQ5T7V8 394 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 PI16Q6UXB8 463 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 XAGE2Q96GT9 111 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 LMBRD1Q9NUN5 540 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 CCDC83Q8IWF9 413 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 NECAB1Q8N987 351 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 CDCA7Q9BWT1 371 aaPredicted RBP17.65■□□□□ 0.42
MBD4-201ENST00000249910 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
MBD4-201ENST00000249910 THRAP3Q9Y2W1 955 aaKnown RBP17.65■□□□□ 0.42
MBD4-201ENST00000249910 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.42
MBD4-201ENST00000249910 SCARF1Q14162 830 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms