RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 FAM182BQ5T319 152 aa22.4■■□□□ 1.18
TUBA4A-201ENST00000248437 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.18
TUBA4A-201ENST00000248437 ZGPATQ8N5A5 531 aaKnown RBP22.39■■□□□ 1.18
TUBA4A-201ENST00000248437 UPF3BQ9BZI7 483 aaKnown RBP22.39■■□□□ 1.18
TUBA4A-201ENST00000248437 MYH3P11055 1940 aa22.39■■□□□ 1.18
TUBA4A-201ENST00000248437 CICQ96RK0 1608 aaPredicted RBP22.39■■□□□ 1.17
TUBA4A-201ENST00000248437 EYA2O00167 538 aa22.39■■□□□ 1.17
TUBA4A-201ENST00000248437 KCNQ2O43526 872 aa22.39■■□□□ 1.17
TUBA4A-201ENST00000248437 FBXO3Q9UK99 471 aa22.39■■□□□ 1.17
TUBA4A-201ENST00000248437 TRPC5Q9UL62 973 aaPredicted RBP22.39■■□□□ 1.17
TUBA4A-201ENST00000248437 PTH1RQ03431 593 aa22.38■■□□□ 1.17
TUBA4A-201ENST00000248437 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
TUBA4A-201ENST00000248437 DBNDD2Q9BQY9 259 aa22.38■■□□□ 1.17
TUBA4A-201ENST00000248437 MED23Q9ULK4 1368 aa22.38■■□□□ 1.17
TUBA4A-201ENST00000248437 RASEFQ8IZ41 740 aa22.38■■□□□ 1.17
TUBA4A-201ENST00000248437 FAM227BQ96M60 508 aa22.38■■□□□ 1.17
TUBA4A-201ENST00000248437 TTC14Q96N46 770 aa22.37■■□□□ 1.17
TUBA4A-201ENST00000248437 HAUS7Q99871 368 aa22.37■■□□□ 1.17
TUBA4A-201ENST00000248437 CDHR2Q9BYE9 1310 aa22.37■■□□□ 1.17
TUBA4A-201ENST00000248437 SPEF2Q9C093 1822 aa22.37■■□□□ 1.17
TUBA4A-201ENST00000248437 ZNF609O15014 1411 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 NECTIN1Q15223 517 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 TICAM2Q86XR7 235 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 MAP4K1Q92918 833 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 TM6SF1Q9BZW5 370 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 QTRT2Q9H974 415 aaKnown RBP22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 EP400Q96L91 3159 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 GOLGA6L22H0YM25 854 aa22.36■■□□□ 1.17
TUBA4A-201ENST00000248437 IL6STP40189 918 aaPredicted RBP22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 SKOR2Q2VWA4 1001 aaPredicted RBP22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 ZBTB1Q9Y2K1 713 aa22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 RREB1Q92766 1687 aa22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 A0A0D9SFI3 127 aa22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 BAG4O95429 457 aaKnown RBP22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 CCDC57Q2TAC2 916 aa22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 PTF1AQ7RTS3 328 aa22.35■■□□□ 1.17
TUBA4A-201ENST00000248437 ERVV-1B6SEH8 477 aa22.34■■□□□ 1.17
TUBA4A-201ENST00000248437 CSF1RP07333 972 aa22.34■■□□□ 1.17
TUBA4A-201ENST00000248437 NLRP10Q86W26 655 aa22.33■■□□□ 1.17
TUBA4A-201ENST00000248437 ZKSCAN1P17029 563 aaPredicted RBP22.33■■□□□ 1.16
TUBA4A-201ENST00000248437 HLFQ16534 295 aa22.33■■□□□ 1.16
TUBA4A-201ENST00000248437 LRRC24Q50LG9 513 aa22.33■■□□□ 1.16
TUBA4A-201ENST00000248437 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.16
TUBA4A-201ENST00000248437 RBM8AQ9Y5S9 174 aaKnown RBP22.33■■□□□ 1.16
TUBA4A-201ENST00000248437 FAM89AQ96GI7 184 aa22.32■■□□□ 1.16
TUBA4A-201ENST00000248437 ZNF594Q96JF6 807 aaPredicted RBP22.32■■□□□ 1.16
TUBA4A-201ENST00000248437 PKP1Q13835 747 aa22.32■■□□□ 1.16
TUBA4A-201ENST00000248437 SEPT12Q8IYM1 358 aa22.32■■□□□ 1.16
TUBA4A-201ENST00000248437 PALLDQ8WX93 1383 aa22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 ONECUT3O60422 494 aaPredicted RBP22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 EDC3Q96F86 508 aaKnown RBP22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 ARXQ96QS3 562 aa22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 ZSWIM6Q9HCJ5 1215 aa22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 CASTP20810 708 aaKnown RBP22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 CREB3L3Q68CJ9 461 aa22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 NEUROD6Q96NK8 337 aa22.31■■□□□ 1.16
TUBA4A-201ENST00000248437 KCNJ4P48050 445 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 AK2P54819 239 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 VPS53Q5VIR6 699 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 RNF20Q5VTR2 975 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 NOL8Q76FK4 1167 aaKnown RBP22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 KBTBD3Q8NAB2 608 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 CEP126Q9P2H0 1117 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 ZDHHC9Q9Y397 364 aa22.3■■□□□ 1.16
TUBA4A-201ENST00000248437 LIMCH1Q9UPQ0 1083 aa22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 RPAP1Q9BWH6 1393 aaPredicted RBP22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 A0A1B0GUL7 405 aa22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 TIMM10P62072 90 aa22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 IFIT5Q13325 482 aaKnown RBP22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 DZIP3Q86Y13 1208 aaKnown RBP22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 JAKMIP1Q96N16 626 aaKnown RBP22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 HMG20BQ9P0W2 317 aa22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 AKAP2Q9Y2D5 859 aa22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 CYP46A1Q9Y6A2 500 aa22.29■■□□□ 1.16
TUBA4A-201ENST00000248437 ZNF831Q5JPB2 1677 aa22.28■■□□□ 1.16
TUBA4A-201ENST00000248437 SLC27A2O14975 620 aa22.28■■□□□ 1.16
TUBA4A-201ENST00000248437 TAF5LO75529 589 aa22.28■■□□□ 1.16
TUBA4A-201ENST00000248437 GPTP24298 496 aa22.28■■□□□ 1.16
TUBA4A-201ENST00000248437 ADCK5Q3MIX3 580 aa22.28■■□□□ 1.16
TUBA4A-201ENST00000248437 ZNF589Q86UQ0 364 aaPredicted RBP22.28■■□□□ 1.16
TUBA4A-201ENST00000248437 SH3TC1Q8TE82 1336 aa22.27■■□□□ 1.16
TUBA4A-201ENST00000248437 PSMA5P28066 241 aa22.27■■□□□ 1.16
TUBA4A-201ENST00000248437 EIF5P55010 431 aaKnown RBP22.27■■□□□ 1.16
TUBA4A-201ENST00000248437 TSGA10IPQ3SY00 556 aa22.27■■□□□ 1.16
TUBA4A-201ENST00000248437 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
TUBA4A-201ENST00000248437 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
TUBA4A-201ENST00000248437 BRD1O95696 1058 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 PDRG1Q9NUG6 133 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 PAG1Q9NWQ8 432 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 MCMDC2Q4G0Z9 681 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 TAF7LQ5H9L4 462 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 ZNF34Q8IZ26 560 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 TTLL11Q8NHH1 800 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 CCDC87Q9NVE4 849 aa22.26■■□□□ 1.15
TUBA4A-201ENST00000248437 COL5A3P25940 1745 aaPredicted RBP22.25■■□□□ 1.15
TUBA4A-201ENST00000248437 LOC102724428A0A0B4J2F2 783 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms