RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 ERCC4Q92889 916 aaPredicted RBP23.77■■□□□ 1.4
CACTIN-202ENST00000248420 GRM8O00222 908 aa23.77■■□□□ 1.4
CACTIN-202ENST00000248420 BRF1Q92994 677 aa23.77■■□□□ 1.4
CACTIN-202ENST00000248420 CLIP2Q9UDT6 1046 aa23.77■■□□□ 1.4
CACTIN-202ENST00000248420 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.4
CACTIN-202ENST00000248420 ELP1O95163 1332 aa23.77■■□□□ 1.4
CACTIN-202ENST00000248420 HSP90B1P14625 803 aaKnown RBP23.77■■□□□ 1.39
CACTIN-202ENST00000248420 CLSTN2Q9H4D0 955 aa23.77■■□□□ 1.39
CACTIN-202ENST00000248420 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
CACTIN-202ENST00000248420 GIGYF1O75420 1035 aaPredicted RBP23.76■■□□□ 1.39
CACTIN-202ENST00000248420 NCBP1Q09161 790 aaKnown RBP23.76■■□□□ 1.39
CACTIN-202ENST00000248420 ANKRD7Q92527 254 aa23.76■■□□□ 1.39
CACTIN-202ENST00000248420 NPHP3Q7Z494 1330 aa23.76■■□□□ 1.39
CACTIN-202ENST00000248420 RNF20Q5VTR2 975 aa23.76■■□□□ 1.39
CACTIN-202ENST00000248420 PLA2G4DQ86XP0 818 aa23.76■■□□□ 1.39
CACTIN-202ENST00000248420 PIP4K2AP48426 406 aaPredicted RBP23.75■■□□□ 1.39
CACTIN-202ENST00000248420 CTIFO43310 598 aaKnown RBP23.75■■□□□ 1.39
CACTIN-202ENST00000248420 MYL6BP14649 208 aa23.75■■□□□ 1.39
CACTIN-202ENST00000248420 SLFNL1Q499Z3 407 aa23.75■■□□□ 1.39
CACTIN-202ENST00000248420 H3BQV1 296 aa23.74■■□□□ 1.39
CACTIN-202ENST00000248420 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
CACTIN-202ENST00000248420 TPD52L1Q16890 204 aaPredicted RBP23.74■■□□□ 1.39
CACTIN-202ENST00000248420 IFFO2Q5TF58 517 aa23.74■■□□□ 1.39
CACTIN-202ENST00000248420 EPHA10Q5JZY3 1008 aa23.74■■□□□ 1.39
CACTIN-202ENST00000248420 IP6K1Q92551 441 aa23.74■■□□□ 1.39
CACTIN-202ENST00000248420 DDX19AQ9NUU7 478 aaKnown RBP23.74■■□□□ 1.39
CACTIN-202ENST00000248420 USP27XA6NNY8 438 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 ALDH1L1O75891 902 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 HOXB7P09629 217 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 Q6ZUG5 572 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 C11orf57Q6ZUT1 292 aaPredicted RBP23.73■■□□□ 1.39
CACTIN-202ENST00000248420 COL15A1P39059 1388 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 TAF5LO75529 589 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 ANKRD1Q15327 319 aa23.73■■□□□ 1.39
CACTIN-202ENST00000248420 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.73■■□□□ 1.39
CACTIN-202ENST00000248420 V9GYY5 206 aaPredicted RBP23.73■■□□□ 1.39
CACTIN-202ENST00000248420 N4BP2Q86UW6 1770 aaPredicted RBP23.72■■□□□ 1.39
CACTIN-202ENST00000248420 DNAJC2Q99543 621 aaKnown RBP23.72■■□□□ 1.39
CACTIN-202ENST00000248420 CRYBG1Q9Y4K1 1723 aa23.72■■□□□ 1.39
CACTIN-202ENST00000248420 SLC39A6Q13433 755 aa23.72■■□□□ 1.39
CACTIN-202ENST00000248420 AKAP4Q5JQC9 854 aa23.72■■□□□ 1.39
CACTIN-202ENST00000248420 HIP1O00291 1037 aa23.71■■□□□ 1.39
CACTIN-202ENST00000248420 RNMTO43148 476 aaKnown RBP23.71■■□□□ 1.39
CACTIN-202ENST00000248420 TDRD7Q8NHU6 1098 aaKnown RBP23.71■■□□□ 1.39
CACTIN-202ENST00000248420 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
CACTIN-202ENST00000248420 IGKV5-2P06315 115 aa23.71■■□□□ 1.39
CACTIN-202ENST00000248420 FGD1P98174 961 aa23.71■■□□□ 1.39
CACTIN-202ENST00000248420 RIC3Q7Z5B4 369 aa23.71■■□□□ 1.39
CACTIN-202ENST00000248420 NAP1L2Q9ULW6 460 aaPredicted RBP23.71■■□□□ 1.39
CACTIN-202ENST00000248420 GUCY1B3Q02153 619 aa23.7■■□□□ 1.39
CACTIN-202ENST00000248420 FILIP1Q7Z7B0 1213 aa23.7■■□□□ 1.39
CACTIN-202ENST00000248420 LINS1Q8NG48 757 aa23.7■■□□□ 1.39
CACTIN-202ENST00000248420 RESTQ13127 1097 aa23.7■■□□□ 1.38
CACTIN-202ENST00000248420 C1orf141Q5JVX7 400 aa23.7■■□□□ 1.38
CACTIN-202ENST00000248420 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
CACTIN-202ENST00000248420 GTF3C6Q969F1 213 aa23.7■■□□□ 1.38
CACTIN-202ENST00000248420 NEK1Q96PY6 1258 aa23.7■■□□□ 1.38
CACTIN-202ENST00000248420 TBX22Q9Y458 520 aa23.7■■□□□ 1.38
CACTIN-202ENST00000248420 TRMT1Q9NXH9 659 aaKnown RBP23.69■■□□□ 1.38
CACTIN-202ENST00000248420 MED23Q9ULK4 1368 aa23.69■■□□□ 1.38
CACTIN-202ENST00000248420 RBM43Q6ZSC3 357 aaKnown RBP23.69■■□□□ 1.38
CACTIN-202ENST00000248420 CCT2P78371 535 aaKnown RBP23.68■■□□□ 1.38
CACTIN-202ENST00000248420 SCRN1Q12765 414 aa23.68■■□□□ 1.38
CACTIN-202ENST00000248420 PLEKHO1Q53GL0 409 aaPredicted RBP23.68■■□□□ 1.38
CACTIN-202ENST00000248420 DBNLQ9UJU6 430 aaKnown RBP23.68■■□□□ 1.38
CACTIN-202ENST00000248420 GOLGA6L19H0YKK7 550 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 CYP21A2P08686 494 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 UTP14CQ5TAP6 766 aaKnown RBP23.67■■□□□ 1.38
CACTIN-202ENST00000248420 DDX46Q7L014 1031 aaKnown RBP23.67■■□□□ 1.38
CACTIN-202ENST00000248420 GOLPH3LQ9H4A5 285 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 CCDC112Q8NEF3 446 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 A0A0G2JLW4 131 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 SMTNL1A8MU46 457 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 PHF8Q9UPP1 1060 aa23.67■■□□□ 1.38
CACTIN-202ENST00000248420 TFCP2Q12800 502 aa23.66■■□□□ 1.38
CACTIN-202ENST00000248420 CHST3Q7LGC8 479 aa23.66■■□□□ 1.38
CACTIN-202ENST00000248420 CCAR1Q8IX12 1150 aaKnown RBP23.66■■□□□ 1.38
CACTIN-202ENST00000248420 SYTL4Q96C24 671 aaPredicted RBP23.66■■□□□ 1.38
CACTIN-202ENST00000248420 MYD88Q99836 296 aa23.66■■□□□ 1.38
CACTIN-202ENST00000248420 NCOA5Q9HCD5 579 aaKnown RBP23.66■■□□□ 1.38
CACTIN-202ENST00000248420 PXDNQ92626 1479 aa23.66■■□□□ 1.38
CACTIN-202ENST00000248420 IQCB1Q15051 598 aa23.66■■□□□ 1.38
CACTIN-202ENST00000248420 LRRC8AQ8IWT6 810 aa23.66■■□□□ 1.38
CACTIN-202ENST00000248420 NPHP1O15259 732 aa23.65■■□□□ 1.38
CACTIN-202ENST00000248420 PDIA6Q15084 440 aa23.65■■□□□ 1.38
CACTIN-202ENST00000248420 CEP135Q66GS9 1140 aa23.65■■□□□ 1.38
CACTIN-202ENST00000248420 PSME1Q06323 249 aa23.64■■□□□ 1.38
CACTIN-202ENST00000248420 APOBRQ0VD83 1088 aa23.64■■□□□ 1.38
CACTIN-202ENST00000248420 STOX1Q6ZVD7 989 aa23.64■■□□□ 1.38
CACTIN-202ENST00000248420 SNRKQ9NRH2 765 aa23.64■■□□□ 1.38
CACTIN-202ENST00000248420 ESCO1Q5FWF5 840 aa23.63■■□□□ 1.37
CACTIN-202ENST00000248420 DBNDD2Q9BQY9 259 aa23.63■■□□□ 1.37
CACTIN-202ENST00000248420 HMG20BQ9P0W2 317 aa23.63■■□□□ 1.37
CACTIN-202ENST00000248420 BECN2A8MW95 431 aa23.63■■□□□ 1.37
CACTIN-202ENST00000248420 SKILP12757 684 aa23.63■■□□□ 1.37
CACTIN-202ENST00000248420 USP28Q96RU2 1077 aa23.63■■□□□ 1.37
CACTIN-202ENST00000248420 ADD1P35611 737 aaKnown RBP23.62■■□□□ 1.37
CACTIN-202ENST00000248420 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
CACTIN-202ENST00000248420 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
CACTIN-202ENST00000248420 CHMP4AQ9BY43 222 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms