RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ATF3P18847 181 aa30.46■■■□□ 2.47
RAB40C-201ENST00000248139 COPRSQ9NQ92 184 aa30.46■■■□□ 2.47
RAB40C-201ENST00000248139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.46■■■□□ 2.47
RAB40C-201ENST00000248139 CABP4P57796 275 aa30.45■■■□□ 2.47
RAB40C-201ENST00000248139 TTC6Q86TZ1 520 aa30.45■■■□□ 2.47
RAB40C-201ENST00000248139 LMBR1LQ6UX01 489 aa30.45■■■□□ 2.46
RAB40C-201ENST00000248139 CAMTA1Q9Y6Y1 1673 aa30.45■■■□□ 2.46
RAB40C-201ENST00000248139 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.44■■■□□ 2.46
RAB40C-201ENST00000248139 FMNL2Q96PY5 1086 aa30.44■■■□□ 2.46
RAB40C-201ENST00000248139 RNF20Q5VTR2 975 aa30.44■■■□□ 2.46
RAB40C-201ENST00000248139 JAK2O60674 1132 aa30.43■■■□□ 2.46
RAB40C-201ENST00000248139 ADCY5O95622 1261 aa30.43■■■□□ 2.46
RAB40C-201ENST00000248139 CAMK4Q16566 473 aa30.43■■■□□ 2.46
RAB40C-201ENST00000248139 DCAF5Q96JK2 942 aa30.43■■■□□ 2.46
RAB40C-201ENST00000248139 SNRKQ9NRH2 765 aa30.42■■■□□ 2.46
RAB40C-201ENST00000248139 SCN11AQ9UI33 1791 aa30.42■■■□□ 2.46
RAB40C-201ENST00000248139 PPFIA3O75145 1194 aa30.41■■■□□ 2.46
RAB40C-201ENST00000248139 ATP5JP18859 108 aa30.41■■■□□ 2.46
RAB40C-201ENST00000248139 TTLL7Q6ZT98 887 aa30.41■■■□□ 2.46
RAB40C-201ENST00000248139 NEUROD6Q96NK8 337 aa30.41■■■□□ 2.46
RAB40C-201ENST00000248139 ADAMTS7Q9UKP4 1686 aa30.41■■■□□ 2.46
RAB40C-201ENST00000248139 LIG1P18858 919 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 HSP90AA2PQ14568 343 aaPredicted RBP30.4■■■□□ 2.46
RAB40C-201ENST00000248139 C17orf53Q8N3J3 647 aaPredicted RBP30.4■■■□□ 2.46
RAB40C-201ENST00000248139 DDX11Q96FC9 970 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 TTC12Q9H892 705 aaPredicted RBP30.4■■■□□ 2.46
RAB40C-201ENST00000248139 NBPF26B4DH59 902 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 TIMM10P62072 90 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 NBPF14Q5TI25 921 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 NBPF10Q6P3W6 841 aaKnown RBP30.4■■■□□ 2.46
RAB40C-201ENST00000248139 NBPF15Q8N660 670 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 AP5Z1O43299 807 aa30.4■■■□□ 2.46
RAB40C-201ENST00000248139 ZNF609O15014 1411 aa30.39■■■□□ 2.46
RAB40C-201ENST00000248139 RBM10P98175 930 aaKnown RBP30.39■■■□□ 2.46
RAB40C-201ENST00000248139 PRKCSHP14314 528 aaPredicted RBP30.39■■■□□ 2.45
RAB40C-201ENST00000248139 FOSBP53539 338 aa30.39■■■□□ 2.45
RAB40C-201ENST00000248139 ZNF594Q96JF6 807 aaPredicted RBP30.38■■■□□ 2.45
RAB40C-201ENST00000248139 FUCA2Q9BTY2 467 aa30.38■■■□□ 2.45
RAB40C-201ENST00000248139 TMEM94Q12767 1356 aa30.38■■■□□ 2.45
RAB40C-201ENST00000248139 A0A0G2JLW4 131 aa30.38■■■□□ 2.45
RAB40C-201ENST00000248139 A1BGP04217 495 aa30.38■■■□□ 2.45
RAB40C-201ENST00000248139 CYP21A2P08686 494 aa30.37■■■□□ 2.45
RAB40C-201ENST00000248139 RABL6Q3YEC7 729 aaPredicted RBP30.37■■■□□ 2.45
RAB40C-201ENST00000248139 TPM2P07951 284 aa30.37■■■□□ 2.45
RAB40C-201ENST00000248139 FAM184AQ8NB25 1140 aa30.37■■■□□ 2.45
RAB40C-201ENST00000248139 CASP7P55210 303 aa30.36■■■□□ 2.45
RAB40C-201ENST00000248139 Q6ZUG5 572 aa30.36■■■□□ 2.45
RAB40C-201ENST00000248139 ZBTB3Q9H5J0 574 aa30.36■■■□□ 2.45
RAB40C-201ENST00000248139 KRT85P78386 507 aa30.36■■■□□ 2.45
RAB40C-201ENST00000248139 NEK1Q96PY6 1258 aa30.36■■■□□ 2.45
RAB40C-201ENST00000248139 GOLIM4O00461 696 aa30.35■■■□□ 2.45
RAB40C-201ENST00000248139 HSP90B1P14625 803 aaKnown RBP30.35■■■□□ 2.45
RAB40C-201ENST00000248139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.35■■■□□ 2.45
RAB40C-201ENST00000248139 CKAP2LQ8IYA6 745 aa30.34■■■□□ 2.45
RAB40C-201ENST00000248139 ALS2Q96Q42 1657 aa30.34■■■□□ 2.45
RAB40C-201ENST00000248139 LETM1O95202 739 aaPredicted RBP30.34■■■□□ 2.45
RAB40C-201ENST00000248139 FOXO4P98177 505 aa30.34■■■□□ 2.45
RAB40C-201ENST00000248139 ANKRD1Q15327 319 aa30.34■■■□□ 2.45
RAB40C-201ENST00000248139 PLBD2Q8NHP8 589 aa30.34■■■□□ 2.45
RAB40C-201ENST00000248139 CSPP1Q1MSJ5 1256 aa30.33■■■□□ 2.45
RAB40C-201ENST00000248139 AFDNP55196 1824 aaKnown RBP30.33■■■□□ 2.45
RAB40C-201ENST00000248139 UVSSAQ2YD98 709 aa30.33■■■□□ 2.45
RAB40C-201ENST00000248139 STOX1Q6ZVD7 989 aa30.33■■■□□ 2.45
RAB40C-201ENST00000248139 MST1RQ04912 1400 aa30.33■■■□□ 2.45
RAB40C-201ENST00000248139 KDM4AO75164 1064 aa30.32■■■□□ 2.44
RAB40C-201ENST00000248139 LRRC24Q50LG9 513 aa30.32■■■□□ 2.44
RAB40C-201ENST00000248139 USPL1Q5W0Q7 1092 aa30.32■■■□□ 2.44
RAB40C-201ENST00000248139 BRF1Q92994 677 aa30.32■■■□□ 2.44
RAB40C-201ENST00000248139 HAUS7Q99871 368 aa30.32■■■□□ 2.44
RAB40C-201ENST00000248139 HMG20BQ9P0W2 317 aa30.32■■■□□ 2.44
RAB40C-201ENST00000248139 ZNF330Q9Y3S2 320 aaPredicted RBP30.32■■■□□ 2.44
RAB40C-201ENST00000248139 MCMDC2Q4G0Z9 681 aa30.31■■■□□ 2.44
RAB40C-201ENST00000248139 CCDC85AQ96PX6 553 aaPredicted RBP30.31■■■□□ 2.44
RAB40C-201ENST00000248139 MRC1P22897 1456 aa30.31■■■□□ 2.44
RAB40C-201ENST00000248139 MCM5P33992 734 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 CEBPZQ03701 1054 aaKnown RBP30.3■■■□□ 2.44
RAB40C-201ENST00000248139 ATG9AQ7Z3C6 839 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 ADAMTSL3P82987 1691 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 JCADQ9P266 1359 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 FGD1P98174 961 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 SPC24Q8NBT2 197 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 SPATA32Q96LK8 384 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 DACT1Q9NYF0 836 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.3■■■□□ 2.44
RAB40C-201ENST00000248139 PDCP20941 246 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 CHST3Q7LGC8 479 aa30.3■■■□□ 2.44
RAB40C-201ENST00000248139 TSGA10IPQ3SY00 556 aa30.29■■■□□ 2.44
RAB40C-201ENST00000248139 KIAA2012Q0VF49 1180 aa30.29■■■□□ 2.44
RAB40C-201ENST00000248139 GTF3C6Q969F1 213 aa30.29■■■□□ 2.44
RAB40C-201ENST00000248139 PUS3Q9BZE2 481 aaKnown RBP30.29■■■□□ 2.44
RAB40C-201ENST00000248139 UQCRHLA0A096LP55 91 aa30.28■■■□□ 2.44
RAB40C-201ENST00000248139 UQCRHP07919 91 aa30.28■■■□□ 2.44
RAB40C-201ENST00000248139 NAP1L2Q9ULW6 460 aaPredicted RBP30.28■■■□□ 2.44
RAB40C-201ENST00000248139 KBTBD3Q8NAB2 608 aa30.27■■■□□ 2.44
RAB40C-201ENST00000248139 GOLGA6L4A6NEF3 574 aa30.27■■■□□ 2.44
RAB40C-201ENST00000248139 SCRN1Q12765 414 aa30.27■■■□□ 2.44
RAB40C-201ENST00000248139 LEO1Q8WVC0 666 aaPredicted RBP30.27■■■□□ 2.44
RAB40C-201ENST00000248139 COL18A1P39060 1754 aa30.27■■■□□ 2.44
RAB40C-201ENST00000248139 KIF1AQ12756 1690 aa30.26■■■□□ 2.44
RAB40C-201ENST00000248139 H7C1W4 665 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms